NNNNCCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTGATCTTTCCAGAACTTTTATCATGAATGGGTGTTGGA
TCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTG
TCTTTGAGTTTGTTTATATAATGGATTGCATTGATGGATTTTCGTTTATT
AAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGA
TTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATT
TTTGCATCATTATTCATAAGAGAAATTGGTCTGAGTTCTCTATCTTTGTT
GGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGA
GTTGGGTAGAGTACCTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAA
CTGGAATTAGATCTTATTTGAAGGTCTGATAGAACTCGGCACTAAACCCA
TCTGGTCCTGGGCTTTTTTTTTGGCTGGGAGACTTTTTATAACTGCTTCT
ATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGATT
CAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGAT
TTTCCAGTTTTGTTGAGTATAGCCTTTTGTAAAAAGATCTGATGGTGTTT
TGGATTTCTTCACGATCTGTTGTTATGTCTCCCTTTTCATTCCTGATTTT
GTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA
CAAAAAATTCCCATTCTTCACTCACCAGAATGCCTAAAATAAACAAGATT
GTTAATGCTCACCCTAGTAAGGAATTTCCAATATAAGCTTTAAAATATTC
CTGGCAGAAATGCACTTGGTATGAACATCTTGAAAAACTGTGGAAACATA
TGAGAAAGATAGTCCTACTCCTTGATACATACACAAAATTTTAACATTTT
GAGTCCAGCAAAAAGGATCTTCAAAAATATTTATAACATTCTTATTCATA
ACAGCTAAGTANATTTTGTGTTATGAAATCATTGGTTTTTAATTTGGTTG
AAGCCTCTCTAGAAATAGTGGTTATAAACCATGATAGCTATACTGTAGAA
AACACCGATAAGCCATGATAAAATGGTTGAATATGATAAAGGTGTTGAGG
GGGTGAAACTTAAGGTGGTGTGCTATGGTGTGTGTGTGTGTGTGTGTGTG
TGATATATATATATATATATCCCTTTTCCCTCTCTCACATTTCATTATTT
CTCCTACTTTCTTTTCTTTTATTCAATTCCTTTTCTTTTTTCCCTATTTC
CCTCCTCCTCTTCTCTTTATTACCCATTTCCTTATTTTAACCCACTTTGT
TTTTTTTTTATTTCTCCTTACATATAAGTCTTTCTAACACTTTCTCACCT
TTCTTAATCTCTGCTTTATTTTAACATTTTCATTTTTTCCTCCTTCTTCC
TAGC

Query= MSMg01no498_o08.g1 MSMg01no498_o08.g1 CHROMAT_FILE:
MSMg01no498_o08.g1 PHD_FILE: MSMg01no498_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:07 2005
         (448 letters)



>mm_chr8_42918783_42919630
          Length = 848

 Score =  791 bits (409), Expect = 0.0
 Identities = 438/448 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattcttcactcaccagaatgcctaaaataaacaagattgttaatgctcaccctagtaag 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 474 cattcttcactcaccagaatgcctaaaataaacaagattgttaatgctaaccctagtaag 415

                                                                       
Query: 61  gaatttccaatataagctttaaaatattcctggcagaaatgcacttggtatgaacatctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gaatttccaatataagctttaaaatattcctggcagaaatgcacttggtatgaacatctt 355

                                                                       
Query: 121 gaaaaactgtggaaacatatgagaaagatagtcctactccttgatacatacacaaaattt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 354 gaaaaactgtggaaacatatgagaaagatagtcctactccttgatacatacacaaaaagt 295

                                                                       
Query: 181 taacattttgagtccagcaaaaaggatcttcaaaaatatttataacattcttattcataa 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 caacattttgagtccagcaaaaaggatcttcaaaaatatttataacattcttattcataa 235

                                                                       
Query: 241 cagctaagtanattttgtgttatgaaatcattggtttttaatttggttgaagcctctcta 300
           |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 cagcaaagtatagtttgtgttatgaaatcattggtttttaatttggttgaagcctctcta 175

                                                                       
Query: 301 gaaatagtggttataaaccatgatagctatactgtagaaaacaccgataagccatgataa 360
           ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||
Sbjct: 174 gaaatagtggttataaaccatgatagctatactgtagaaaagattgataagccatgataa 115

                                                                       
Query: 361 aatggttgaatatgataaaggtgttgagggggtgaaacttaaggtggtgtgctatggtgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 aatggttgaatatgataaaggtgttgagggggtgaaacttaaggtggtgtgctatggtgt 55

                                       
Query: 421 gtgtgtgtgtgtgtgtgtgtgatatata 448
           ||||||||||||||||||||||||||||
Sbjct: 54  gtgtgtgtgtgtgtgtgtgtgatatata 27


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space:   367044
Effective search space used:   367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)