Query= MSMg01no499_i16.b1 MSMg01no499_i16.b1 CHROMAT_FILE:
MSMg01no499_i16.b1 PHD_FILE: MSMg01no499_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:57 2005
(328 letters)
>mm_chr8_14060122_14060849
Length = 728
Score = 625 bits (323), Expect = 0.0
Identities = 326/327 (99%)
Strand = Plus / Minus
Query: 2 ggtcaacagacctgaagaagagccaatgtagtaagtgtatcttgctgtggcctaactgga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggtcaacagacctgaagaagagccaatgtagtaagtgtatcttgctgtggcctaactgga 469
Query: 62 ggattccattagtgtcccatgggcacaatgacgtgagaagtataagaattccaggcatgg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ggattccattagtgtcccatgggcacaatgacgtgagaagtataagaattccaggcatgg 409
Query: 122 acttcttacattaaccaccagacttgctgctctttcctaggactgcagggcttctacaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 acttcttacattaaccaccagacttgctgctctttcctaggactgcagggcttctacaaa 349
Query: 182 tctggtggagtccccaacaagtagatgcagagcccagaacccgcagctctttctggtata 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tctggtggagtccccaacaagtagatgcagagcccagaacccgcagctctttctggtata 289
Query: 242 agccatagagacatctgagaggagcaaaggggagtttctagaccccctcagttgtcattt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agccatagagacatctgagaggagcaaaggggagtttctagaccccctcagttgtcattt 229
Query: 302 taagcaaagaaggcatgggggttgaga 328
|||||||||||||||||||| ||||||
Sbjct: 228 taagcaaagaaggcatggggattgaga 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_i16.g1 MSMg01no499_i16.g1 CHROMAT_FILE:
MSMg01no499_i16.g1 PHD_FILE: MSMg01no499_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:57 2005
(414 letters)
>mm_chr8_13946999_13947812
Length = 814
Score = 700 bits (362), Expect = 0.0
Identities = 404/430 (93%), Gaps = 20/430 (4%)
Strand = Plus / Plus
Query: 1 aaaggtgtgaaaagccgagggaggtacgagaccgataacgcggtgcttatgctgacgaca 60
|||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 205 aaaggtgtgaaaagac----gaggtacaagaccgagaacgcggtgcttatgctgacgaca 260
Query: 61 ggatcgacgcaattgaaatcacaccagtgcccaggccaatgggaaagctggggaacgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatcgacgcaattgaaatcacaccagtgcccaggccaatgggaaagctggggaacgctg 320
Query: 121 ccaaggccctgcccgttgagctccagggtattaaagcacaaactcattcacagaggactg 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ccaaggccctgcccgttgagctccagggtattaaagcacaaactcgttcacagaggactg 380
Query: 181 aggttcaagtcccagcacccacgtggaagctcacaacggtctgtagctccagttccaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggttcaagtcccagcacccacgtggaagctcacaacggtctgtagctccagttccaagg 440
Query: 241 ggatcctaccctctccactgacctctagaggcaccaagcgcacactgcagacatacgcac 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ggatcctaccctctccactgacctctagaggcaccaagcacacactgcagacatacgcac 500
Query: 301 aggcagaacacccatactcgtaaaaacaaaatgcttttctaaagcagaacaagagtgact 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 aggcagaacacccatactcgtaaaaacaaaatgcttttcgaaagcagaacaagagtgact 560
Query: 361 ggacagaga----------------gctttagcagagacacctagggaggtgcttttcca 404
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 ggacagagatcttcaagggaatcctgctttagcagagacacctagggaggtgcttttcca 620
Query: 405 agttagccta 414
||||||||||
Sbjct: 621 agttagccta 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
