Query= MSMg01no501_p14.b1 MSMg01no501_p14.b1 CHROMAT_FILE:
MSMg01no501_p14.b1 PHD_FILE: MSMg01no501_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:53 2005
(637 letters)
>mm_chr8_95728836_95729867
Length = 1032
Score = 1058 bits (547), Expect = 0.0
Identities = 616/647 (95%), Gaps = 17/647 (2%)
Strand = Plus / Minus
Query: 1 ttgtaaagcaattctctatagcatggatcatttgaaaatatgccccaccttacacacaag 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1002 ttgtaaagcaattctctatagcatggatcatttgaaaacatgccccaccttacacacaag 943
Query: 61 cgtgcacatgcatgc----acgcacacatgcatgtactcacacatgtacatactcagaca 116
||||||||||||||| || |||||| ||||||||||||||||||||||||||||||
Sbjct: 942 cgtgcacatgcatgcacaaacacacaca--catgtactcacacatgtacatactcagaca 885
Query: 117 tggattattcattatttttccctcttgtgaataatttttgcaaag-----t-tatttcat 170
|||||||||||||||||||||||||||||||||| |||||||| | | ||||||||
Sbjct: 884 tggattattcattatttttccctcttgtgaataagttttgcaatgggatatctatttcat 825
Query: 171 tttacagtttttgcccgagttgtctccactttggggatcaaacccagagagccatggtct 230
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 824 tttacagtttttgcccgagttgtctccactttgggaatcaaacccagagagccatgttct 765
Query: 231 agccaacatcttatagcttttcttctgttttcttgtagctgtcttagtttctcattgtga 290
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 764 agccaacatcttatagtttttcttctgttttcttgtagctgtcttagtttcccattgtga 705
Query: 291 attagacttacaatccaattttccattctccttccctggcatcatgtataacaccaagtc 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 attagacttacaatccaattttccattctccttccctggcatcatgtataacaccaagtc 645
Query: 351 tttcctttgtgtaaatcttctctttttcttagttcaactaagcttattagtttcagtttt 410
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 644 tttcctttgtataaatcttctctttttcttagttcaactaagcttattagtttcactttt 585
Query: 411 ctttttaaaaagaaagaaaaaagaaacttgattttcttgactcttaccttttcttatagc 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctttttaaaaagaaagaaaaaagaaacttgattttcttgactcttaccttttcttatagc 525
Query: 471 ttcagaactcacttaaaaaagaaaccctcttatttagttagttagttttatgtttgttgg 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttcagaactcacttaaaaaagaaaccctcttatttagttagttagttttatgtttgttgg 465
Query: 531 cattttatcttcatatatgtctgggcaccatgtgtgtgtgccttgtgtccatggaagcca 590
|||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 464 cattttatattcatatatgtctgggcaccatatgtgtgtgccttgtgtctatgaaagcca 405
Query: 591 ggagagggtattgtatttcctgggactgtagcagctatggttgtaac 637
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 404 ggagagggtatt-----tcctgggactgtagcagctatggttgtaac 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1032
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1022
Effective search space: 640794
Effective search space used: 640794
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_p14.g1 MSMg01no501_p14.g1 CHROMAT_FILE:
MSMg01no501_p14.g1 PHD_FILE: MSMg01no501_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:54 2005
(612 letters)
>mm_chr8_95706666_95707678
Length = 1013
Score = 1162 bits (601), Expect = 0.0
Identities = 609/612 (99%), Gaps = 1/612 (0%)
Strand = Plus / Plus
Query: 1 tggctcctccagcactaagtctgtttgcatactgctgtgcttcccaccatgatgataatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggctcctccagcactaagtctgtttgcatactgctgtgcttcccaccatgatgataatg 260
Query: 61 gactgaacctctgaaactgtaagctagccctaattaaaaaaattaataacagttgtcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactgaacctctgaaactgtaagctagccctaattaaaaaaattaataacagttgtcttg 320
Query: 121 tttatggtgtctcttctcagcaatgaaaccctaactaaggcagaggtatttcagaacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttatggtgtctcttctcagcaatgaaaccctaactaaggcagaggtatttcagaacata 380
Query: 181 tctaggtagagaatgtaggagttgattgggcctgaactagtttttgttgcatatgcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaggtagagaatgtaggagttgattgggcctgaactagtttttgttgcatatgcaaga 440
Query: 241 agatg-actgngcccattgagggaacatttaggagaaaccttctgtgttctatcttatgc 299
||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatgaacggtgcccattgagggaacatttaggagaaaccttctgtgttctatcttatgc 500
Query: 300 tcaagcatacttaggcatgtatgtaataaaaatcaaatgcatcatgggatggaacaggca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaagcatacttaggcatgtatgtaataaaaatcaaatgcatcatgggatggaacaggca 560
Query: 360 ctgttagaaaaggcttacataattcaagtctgtcaatcaaaatagagatgcacctaacct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgttagaaaaggcttacataattcaagtctgtcaatcaaaatagagatgcacctaacct 620
Query: 420 atgtcacctagtaattgctctcctgcttttggtcttcatgaaagaaactcccaaacattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtcacctagtaattgctctcctgcttttggtcttcatgaaagaaactcccaaacattt 680
Query: 480 cttggaagtgttaagtaatctcacccatgtggtccactgtcactcttggcaatgtatttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttggaagtgttaagtaatctcacccatgtggtccactgtcactcttggcaatgtatttc 740
Query: 540 attctaatatgtgtaatcatttcaccttccttgatattatgaaatctgtgagggctttca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attctaatatgtgtaatcatttcaccttccttgatattatgaaatctgtgagggctttca 800
Query: 600 ttccaatgaaag 611
||||||||||||
Sbjct: 801 ttccaatgaaag 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1013
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1003
Effective search space: 603806
Effective search space used: 603806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
