Query= MSMg01no503_d12.b1 MSMg01no503_d12.b1 CHROMAT_FILE:
MSMg01no503_d12.b1 PHD_FILE: MSMg01no503_d12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:26 2005
(521 letters)
>mm_chr8_13770972_13771892
Length = 921
Score = 934 bits (483), Expect = 0.0
Identities = 507/519 (97%), Gaps = 8/519 (1%)
Strand = Plus / Minus
Query: 7 aaaataaaaatgaattaactcatttttataaaacaaaaatccaatgaagagcagctctgg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aaaataaaaatgaattaactcatttttataaaacaaaaatccaatgaagagcagctctgg 551
Query: 67 tcagtggagttttaagagccaaggccccacttcaaagagcccacaccaggcggaagccct 126
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 550 tcagtggagttttaagagccaaggccccacttcaaagagcccacaccaggtggaagccct 491
Query: 127 caggtacttactctccattctgaaaggcaaccactccaacctcatggatgacaaacgggt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 490 caggtacttactctccattctgaaaggcaaccactccaacctcatggatgacaaatgggt 431
Query: 187 cttctggggcgatgctcagagcttggccaaagaaccgctcagccagttttttt----tta 242
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 430 cttctggggcgatgctcagagcttggccaaagaaccgctcagccag----tttcgagtta 375
Query: 243 ttggtcagaccatattctaatccaatatatagcattggcaagtgacacctgaaaagattt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttggtcagaccatattctaatccaatatatagcattggcaagtgacacctgaaaagattt 315
Query: 303 gaaaatttcacatattcaacgcttgaaactttgtaatgcaatagaaatttgtcagcttta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gaaaatttcacatattcaacgcttgaaactttgtaatgcaatagaaatttgtcagcttta 255
Query: 363 gatcctatcattcacttttttctaactctagatacagtccgaacaggaaaaaaaaaaagc 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 254 gatcctatcattcacttttttctaactctaaatacagtccgaacaggaaaaaaaaaaagc 195
Query: 423 agtcaacagaaaccgtcctagcagaagaggagatactggacttaaaagacaatactttaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 agtcaacagaaaccgtcctagcagaagaggagatactggacttaaaagacaatactttaa 135
Query: 483 ataaactaggataatattcaaagaactaaagaaaattaa 521
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 134 ataagctaggataatattcaaagaactaaagaaaattaa 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_d12.g1 MSMg01no503_d12.g1 CHROMAT_FILE:
MSMg01no503_d12.g1 PHD_FILE: MSMg01no503_d12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:26 2005
(299 letters)
>mm_chr8_13663020_13663718
Length = 699
Score = 557 bits (288), Expect = e-163
Identities = 294/296 (99%)
Strand = Plus / Plus
Query: 1 ctttcacagaggaaatgccacctcccacccacagggcatccagcctctcagagtaccacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttcacagaggaaatgccacctcccacccacagggcatccagcctctcagagtaccacg 260
Query: 61 ccaatgcaaccccggcaggcactgccttttatcccaaataacttctaactgcatagctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaatgcaaccccggcaggcactgccttttatcccaaataacttctaactgcatagctcc 320
Query: 121 tccaaacaccttaactgtagcaagtcggccatcagggacaagctacagatgtgtttctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccaaacaccttaactgtagcaagtcggccatcagggacaagctacagatgtgtttctag 380
Query: 181 agggtcactgagccactgggggtcattccaatgcaaatcggaatagcaggtctgttttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 agggtcactgagccactgggggtcattccaatgcaaatcggaatagcaggtctcttttgt 440
Query: 241 aggtgttacaggaaaagtgtcgatctctcctcgtactcccaaaagaaatgagagat 296
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 aggtgttacaggaaaagtgtcgatctctcctcgtactccaaaaagaaatgagagat 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
