CCACTCCTTTTNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTT
CAGGATCCGCGGAATTCTAAGCTGTTTCCGTAACAATGATTTTGGCCACA
GACAGGGTGGGTGTCTCCTGAGGCTCCTAGATACCCTGTGTAGCAATGAG
CAAGTTTTGGGAAAGCTTTTTAGACATCATTTCATCCCATAAGCTATTTA
AAAAGAGCTGTGAAATACCCATGAACTACAATTATGACAAGAATCACATG
GACCAGTCTGGAGATTTACCAAGCTCACCCAAGGAAAGATGCCAATTCGA
GGGTGGTTACTTATTTTTAACCTTACAAGTTTAACCTTCCAAGATGGATT
AATTAAATTTGCTTCAGGGTACCAGCTATTATACAAGAGCCACATACCAT
CTTCACTAACTTGCTTGTCAAAAATAGTATGTTCAGTGCGTCCGTCTGTG
GTGTTCTTGCACTGGCCTGTTGGTCTCCTAAGTACCGTTGACTCAGGTTT
AATTAAAGGCTGGCTGCAGATGGAGAGTGTTTTCAGTAGTCACAGAAAGA
AGTACCGTGAGCATTCAGATCTCTGTTGCATCTTTTTAATTTTCTACCCA
AGAAGTCACTTAGAAAAACCATCTCACTGGCTGCAGACCGGACCCATTGA
CTGCTCCTCAGACTGTTTTCATTCCCTCACGGACAGAAGATAATGAGATG
CTATATAATGAATN

NTTGCTCTTTTTTCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTATCTCGCCGGNAATTTGCACT
NTNNCCTGGNCTGCCCTTGGCCCTTTCCCAGAATGGTTAGAAAACTCTTT
TAGGCTTCCCTCCCGGGCAACCCCATGGTTCTGGCCTGGCATGGGCCTTG
CCCCCTTGGGCTTTCCCGGGGCCTGGGACATTAAATGGGGCCGGGAACCC
CCTCTCTTTAAAAAATCTGGGTTTACCCCCCCCCCCAAAGGGAAAAGGGT
TTTCTCCTTTTATAAAAAAATATTCCCTTGTGGGCCAAGGGGGGGCCCCC
TTTTTTTTTTTTACGGGAAAAAGGGAGGAAAAAAAATTTTTTTTTCTTCC
TCTTCTTCCAAAGGGCGATAATAAAATTAAGGGTGTTGTTGGGGGGGGAT
TTGTTCGGCACCTTTTTTTTTTTTTTTTTTTGGTGGGGGGGNNNCCNCCT
CCNNCCNNCCGGGGTGGGGGGGGGGGTTTTAATTGTTTTCTTCTCCACCC
CCCCCGCTTTTTTTTTTTTTGTTTGGCCATCCATCAAATAAATACCCACA
GAAANNNCCCTCAGACTTTNNTTTTTTTTTTTTTCTCCTTCCCTTTTTTT
AGAATTTAATTTTTTTTTTTGGTTGGGGGTCGGCTGCATTACAAATTTTT
TTTTTCTCTTTTCCCGGGTGGAGGAAGAAAAAAAAAAAAAAAAATTTCTC
TTCCCCTCT

Query= MSMg01no503_i21.b1 MSMg01no503_i21.b1 CHROMAT_FILE:
MSMg01no503_i21.b1 PHD_FILE: MSMg01no503_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:52 2005
         (573 letters)



>mm_chr8_81675274_81676246
          Length = 973

 Score = 1077 bits (557), Expect = 0.0
 Identities = 567/573 (98%), Gaps = 6/573 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattctaagctgt---ttccgtaacaatgattttggccacagacagggtgggtgtctcc 60
           ||||||||||||||   |   |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctaagctgtgagt---gtaacaatgattttggccacagacagggtgggtgtctcc 260

                                                                       
Query: 61  tgaggctcctagataccctgtgtagcaatgagcaagttttgggaaagctttttagacatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaggctcctagataccctgtgtagcaatgagcaagttttgggaaagctttttagacatc 320

                                                                       
Query: 121 atttcatcccataagctatttaaaaagagctgtgaaatacccatgaactacaattatgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttcatcccataagctatttaaaaagagctgtgaaatacccatgaactacaattatgac 380

                                                                       
Query: 181 aagaatcacatggaccagtctggagatttaccaagctcacccaaggaaagatgccaattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaatcacatggaccagtctggagatttaccaagctcacccaaggaaagatgccaattc 440

                                                                       
Query: 241 gagggtggttacttatttttaaccttacaagtttaaccttccaagatggattaattaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagggtggttacttatttttaaccttacaagtttaaccttccaagatggattaattaaat 500

                                                                       
Query: 301 ttgcttcagggtaccagctattatacaagagccacataccatcttcactaacttgcttgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgcttcagggtaccagctattatacaagagccacataccatcttcactaacttgcttgt 560

                                                                       
Query: 361 caaaaatagtatgttcagtgcgtccgtctgtggtgttcttgcactggcctgttggtctcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaaatagtatgttcagtgcgtccgtctgtggtgttcttgcactggcctgttggtctcc 620

                                                                       
Query: 421 taagtaccgttgactcaggtttaattaaaggctggctgcagatggagagtgttttcagta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taagtaccgttgactcaggtttaattaaaggctggctgcagatggagagtgttttcagta 680

                                                                       
Query: 481 gtcacagaaagaagtaccgtgagcattcagatctctgttgcatctttttaattttctacc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtcacagaaagaagtaccgtgagcattcagatctctgttgcatctttttaattttctacc 740

                                            
Query: 541 caagaagtcacttagaaaaaccatctcactggc 573
           |||||||||||||||||||||||||||||||||
Sbjct: 741 caagaagtcacttagaaaaaccatctcactggc 773


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space:   542169
Effective search space used:   542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)