CTCTTTCTCCTTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCTTCTCATGTCTTCTTCAAGATCCATATATGCCTTG
TGTATGAAATGTTGATTTCCAAACATAGCAAATATAGTCCAACTATATAG
AAGTTCATTAGGATGCATTGAGTTGGACCAGGGCTGGGCTTGTTTGCTTC
AGTGTAGCTGTAGGGTGTTTTTATCTGCCAGATTCTTTCAATAAAGTAAT
TTTCATTTCTAAAAAAATTTTAGCTCAATTCATTACAGTTTGTTTCCCTT
TAATTCTAGCATTAGCTTTTACCTTAAGAGACCATTTTCATTTAAAATTT
GTCACAAATAATACTATTATTTATGGCAACTATGTATGTTTTATCAGTTT
CAATTCTGTGGCACTGTGGGTCAGGCAGTGATTTTCTAGTCTTGTTTATA
CTGTTCTTCACAATTCTAAACTGTAGCCCATTAAAATTATCCCCAGGAGT
CTCATATTGCAAATCACGGTTATGGAAATTGAGGGGAATTATGCTCACAT
TATTTCTGCTCTCATTCATTAATTGAATTGTTCCTATTCTTTTTGCAGTA
CCTAATGCCAATGACTTATTTGCAAGATTATTTTAATAATAATGATTTAA
TAAACTGTGGAAATGATATAAATGTGACCATTCTTATGTTTGGCAAGAGA
GAGAGAAGGATTAAGAGCGAAGGAGAGAGAAAT

CCTTTTTTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTCTGAAGAAACAGAC
TTGGAGGAGGAAGCAGCGCGTTATGAGAGAAAAGGGTACCAGCCAGATAA
AATGCTAGCTAATCAGTTAAGGAAAAAGCCAAAAGCGGCTGGTGAAGGCC
AGCATGCTGCTCGGCCTCCGGGCAGTCGGCTTCAAGGTCATAGTGCACTT
CCGCCCTATGCGGAGCCCCCGCCCTGCGTAAGGCGTCAGCCCTGCGCAGA
GAGGCAATGGACAGAGAGGCAATGCTCATACTCGTTCATTCCTAGAGAGG
AACAAAGAAAAATGCAACAGGCATTTCTGGTCTTTGAAGGAGCCAAGGGT
GGGCGTGTCCACGCTCTGGTAGAGTATGTGCAGATTAAAGAGCTTGCCGA
GTCAGTCCATAAATATGGAACCAATGCTAATTTTACCTTGGTGCAGTTAG
ACAGGCTTGCCGGCATGGCACTAACTCCTGCCGACTGGCAAATGATTGCA
AAAGCCGCTCTCCCTAGTATGGGCAATTATATGGAATGGAGAGCTCTATG
GCAAGAGGCTGCACAAGCGCAGGCCCGAGCAAAAACTGCTGCTTTGACTC
CAGAGCAGAGAGATTGGACTTTTGACTTGTTAACTGGTCAGGGAGCTTAT
ACTGCTGATCAAACAACTACCACTGGGGAGCTN

Query= MSMg01no503_l17.b1 MSMg01no503_l17.b1 CHROMAT_FILE:
MSMg01no503_l17.b1 PHD_FILE: MSMg01no503_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:06 2005
         (648 letters)



>mm_chr8_66132568_66133611
          Length = 1044

 Score = 1151 bits (595), Expect = 0.0
 Identities = 627/645 (97%), Gaps = 13/645 (2%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttctcatgtcttcttcaagatccatatatgccttgtgtatgaaatgttgattt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 ggaattcttctcatgtcttcttcaagatccatatatgccttgtgtatgaaatgttgattt 769

                                                                       
Query: 64  ccaaacatagcaaatatagtccaactatatagaagttcattaggatgcattgagttggac 123
           ||||||         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ccaaac---------atagtccaactatatagaagttcattaggatgcattgagttggac 718

                                                                       
Query: 124 cagggctgggcttgtttgcttcagtgtagctgtagggtgtttttatctgccagattcttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 cagggctgggcttgtttgcttcagtgtagctgtagggtgtttttatctgccagattcttt 658

                                                                       
Query: 184 caataaagtaattttcatttctaaaaaaattttagctcaattcattacagtttgtttccc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 657 caataaagtaattttcatttctaaaaaaattttagctcaattcattacagtttatttccc 598

                                                                       
Query: 244 tttaattctagcattagcttttaccttaagagaccattttcatttaaaatttgtcacaaa 303
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 597 tttaattctagcattagcttttaccttaagagaccattttcatttaaaatttgtcac--- 541

                                                                       
Query: 304 taatactattatttatggcaactatgtatgttttatcagtttcaattctgtggcactgtg 363
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 -aatactattatttatggcaactatgtatgttttatcagtttcaattctgtggcactgtg 482

                                                                       
Query: 364 ggtcaggcagtgattttctagtcttgtttatactgttcttcacaattctaaactgtagcc 423
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 481 ggtcaggcagtgattttctagtcttgtgtatactgttcttcacaattctaaactgtagcc 422

                                                                       
Query: 424 cattaaaattatccccaggagtctcatattgcaaatcacggttatggaaattgaggggaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cattaaaattatccccaggagtctcatattgcaaatcacggttatggaaattgaggggaa 362

                                                                       
Query: 484 ttatgctcacattatttctgctctcattcattaattgaattgttcctattctttttgcag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttatgctcacattatttctgctctcattcattaattgaattgttcctattctttttgcag 302

                                                                       
Query: 544 tacctaatgccaatgacttatttgcaagattattttaataataatgatttaataaactgt 603
           |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taccaaatgccaatgtcttatttgcaagattattttaataataatgatttaataaactgt 242

                                                        
Query: 604 ggaaatgatataaatgtgaccattcttatgtttggcaagagagag 648
           |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 ggaaatgatataaatgtgaccattcttatgtttggcaagaaagag 197


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1044
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1034
Effective search space:   659692
Effective search space used:   659692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)