Query= MSMg01no505_h14.b1 MSMg01no505_h14.b1 CHROMAT_FILE:
MSMg01no505_h14.b1 PHD_FILE: MSMg01no505_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:24 2005
(628 letters)
>mm_chr8_25093652_25094679
Length = 1028
Score = 1118 bits (578), Expect = 0.0
Identities = 614/626 (98%)
Strand = Plus / Plus
Query: 1 caaaatatgatttaatttgccttggacaattcatagattgtctcaaggaagcattacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaatatgatttaatttgccttggacaattcatagattgtctcaaggaagcattacaat 260
Query: 61 aattacatcttagaccttgggtggctctaaaagaccagtttatatttattcattttagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattacatcttagaccttgggtggctctaaaagaccagtttatatttattcattttagag 320
Query: 121 gaaataaaatgaaaaggagcaaaggaaaagtatcttcatttgcctcaatccgggtcctga 180
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 gaaagaaaatgaaaaggagcaaaggaaaagtatcttcatttgcctcactccgggtcctga 380
Query: 181 gctgagtgacacgagctgctgaggtctcaggacttctacttataaatggtggtccttggt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 gctgagtgacacgagctgctgaggtctcaggacttctacttataaacggtggtccttggt 440
Query: 241 gtgtttatggcagggttaaggagcccatgcctgtgtcttaataatgccaagttgcagtgg 300
||| | ||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcacagggcagggttgaggagcccgtgcctgtgtcttaataatgccaagttgcagtgg 500
Query: 301 tattggccttgccccactgattcgtatcttggtacattaaactcccaaccctgctggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattggccttgccccactgattcgtatcttggtacattaaactcccaaccctgctggctg 560
Query: 361 ccgtggttctgttgctcattatccgctctgtgtctgagtccacgcttctttgcagagtgc 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 ccgtggttctgttgctcattatccgttctgtgtctgagtccacgcttctttgcagagtgc 620
Query: 421 cggcagctcagacctgatcatttagactaacttgaagcacagctaaaatcaaatccagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cggcagctcagacctgatcatttagactaacttgaagcacagctaaaatcaaatccagtt 680
Query: 481 tttagttatttccctccgaatgtgaatgctagatttgggtaccacctttagttccttatt 540
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 tttagttatttccctccgaatgtgaatgctagatttggataccacctttagttccttatc 740
Query: 541 tctgtattcattctttaatgagccaagctctggccttgccaagtacatcaaatattctcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctgtattcattctttaatgagccaagctctggccttgccaagtacatcaaatattctcc 800
Query: 601 tctccccatatatttgattttcctgg 626
||||||||||||||||||||||||||
Sbjct: 801 tctccccatatatttgattttcctgg 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_h14.g1 MSMg01no505_h14.g1 CHROMAT_FILE:
MSMg01no505_h14.g1 PHD_FILE: MSMg01no505_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:24 2005
(649 letters)
>mm_chr8_25210334_25211382
Length = 1049
Score = 812 bits (420), Expect = 0.0
Identities = 441/448 (98%), Gaps = 2/448 (0%)
Strand = Plus / Minus
Query: 203 gtatgtggatgttttgtttgcatgtatttctgtgcaccattttcatgccaagtgcctatg 262
|||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||
Sbjct: 1049 gtatgtggatgttttgtttgtatgtatttctgtgcaccacatacatgccaagtgcctatg 990
Query: 263 gagatcaggaaagagaattagatcccctgggactggagttatagataaatgtgaactgtc 322
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 989 gagatcaggaaagagaattagatcccctgggactggagttatagacaaatgtgaactgtc 930
Query: 323 atgtgggagctgggaattgaagcctgggcctctggaagagcagccagtactcttaactaa 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 atgtgggagctgggaattgaagcctgggcctctggaagagcagccagtactcttaactaa 870
Query: 383 caaagcatctcacaggcccccaactttaaaaaaaagatgtctcaaatttgtttattcaga 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 caaagcatctcacaggcccccaactttaaaaaaaagatgtctcaaatttgtttattcaga 810
Query: 443 cttacccaaagctctgtttttgagcagaaataagtagttactttgagatactaggcctac 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 cttacccaaagctctgtttttgagcagaaataagtagttactttgagatactaggcctac 750
Query: 503 ttataactttgttactgttagtatcctgagccagtaaaaaaaaattgtgaaatgaaaatt 562
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 749 ttataactttgttactgttagtatcctgagccagt-aaaaaaaattgtgaaatgaaaatt 691
Query: 563 tctaattacattcatatttgacactccaaaagaaacctttcttgt-aaaaaaaagaaata 621
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 690 tctaattacattcatatttgacactccaaaagaaacctttcttgtaaaaaaaaagaaata 631
Query: 622 ttgattttttttccacagttattgaaat 649
||||||||||||||||||||||||||||
Sbjct: 630 ttgattttttttccacagttattgaaat 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
