AACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATGCG
CGGAATTCAGTGCAAGTACCCACATTGCTTGAAAGGCATTATTTCCCCCC
AAATAAGTTCGTGTAGTTGACAAAGCTCAAGAGTAATTTCCGCACCCCAC
AGCCTCACCTATGACGCAAAGCGTACAAACAAATCTAAAGAGGAGGCAGC
TGCTGCTCTGACAGAGATGCCATCTTTTCAAAACATCCCCTGCCATACGC
TTCTTACTCAAATGTGCACCCTATGAGTGGCGTTGCCTCTTCAGAGTTTG
GAAACAGCTGAGTTGTACTGGGGATGTATTGTCAGGAACTGTGAAGTGAG
CTTTAATTTCCTTGTGCCTGATGACATCAGCTTTAAAGCAAGGACACCTT
CTTCATGGCACTTTAGACCGTATTCCCTCCTTCCATCCTTCCTTTACTTC
CTTCTTCCTTCCTTCCTTTCTGCTTTCTTTCCTTCCCTCCCCCTTCTTTC
CTTTTCCTCTCCTCCCCTCCTCCCTCCCTTCCTCTCCTCCTCCATCTCTC
CCTTCCCTCCTCCCTCCCTCCCTCCCAACTTCCCTCCCTTCCTTCCTTTC
TTCCTCTTTTTTCTTCTTTCTTCCTTCCTCTCCCTCTCTGCTATGGATAG
AACCCTACTTTGTGCTCCCACCAGAGCCCATGTGCCTTTTAGTTAGCTGC
GTCTTCTAGAACAACCTTGCTGTAGCTCTCTTCCTGGACTTTGTTCTCCT
TTC

GACGATGCTGTGAGAGGCCTGGNGGCCGCCTGGCTTCATCACAGGGGNNG
AACTATAGAAGGATCACAAAAATACAGCGTAAAGCTCTACAGTGTGAATT
TAGCATGGTTTATTTATCCTCTTTCCTGTCCATAGACACTTGAGATATTC
CAGTATTTTCTTATGACCCTATGGATGTTGCTGGGTCAGGAGAGCAAATA
AGCATGTTTACAAGGTGAGAACTGCTTGATCCTGGATAGACACACCAACC
TTAGTACACAATGCAAACTGTTTTCCAAATTGCTTCTGTGCTGTTGTCAA
TAGTGTCTGGGGTTCGACATGTTTTCATTCTGGCTAACAGTAGCTCTTGT
CAGTCTTCAATTGCATCAGTAGAGGAGAGGGACTTGGCATTTAATTTTAA
TTTTAATTTGGATTCCCTGGTGACTAATGAGATTGGACCTCCTTCTGTGA
TTTTCTTCACAATTTGAGCACCTCTCTAATGAACTATCCTTCAAATAGCC
TCAGCTACTTTCCAGTGGGGCTTTTGTCTCCGACTTTGACTTTCAGTTTA
AAAAAATAATGCCATATATATATATATATATATATACATATATATATATA
TATATGATGTAATTCTTTGTGTGTGTGTGCTGGTTTTACAATAATATCAA
AATACAAAACGCATGAATATAGATAAGAAAAATGTGAAAGACATTTGTGT
ACTAAATTGTGATACATAATAATAAGGGATTGACAAATACCATGCGTGGA
TT

Query= MSMg01no506_m14.b1 MSMg01no506_m14.b1 CHROMAT_FILE:
MSMg01no506_m14.b1 PHD_FILE: MSMg01no506_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:06 2005
         (676 letters)



>mm_chr8_130706303_130707375
          Length = 1073

 Score =  913 bits (472), Expect = 0.0
 Identities = 498/512 (97%), Gaps = 11/512 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttgaaaggcattatttccccccaaataagttcgtgtagttgacaaagctcaagagtaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cttgaaaggcattatttccccccaaataagttcgtgtagttgacaaagctcaagagtaat 483

                                                                       
Query: 61  ttccgcaccccacagcctcacctatgacgcaaagcgtacaaacaaatctaaagaggaggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttccgcaccccacagcctcacctatgacgcaaagcgtacaaacaaatctaaagaggaggc 423

                                                                       
Query: 121 agctgctgctctgacagagatgccatcttttcaaaacatcccctgccatacgcttcttac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agctgctgctctgacagagatgccatcttttcaaaacatcccctgccatacgcttcttac 363

                                                                       
Query: 181 tcaaatgtgcaccctatgagtggcgttgcctcttcagagtttggaaacagctgagttgta 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 362 tcaaatgtgcaccctatgagtggcgttgcctcttcagaatttggaaacagctgagttgta 303

                                                                       
Query: 241 ctggggatgtattgtcaggaactgtgaagtgagctttaatttccttgtgcctgatgacat 300
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctggggatgtataggcaggaactgtgaagtgagctttaatttccttgtgcctgatgacat 243

                                                                       
Query: 301 cagctttaaagcaaggacaccttcttcatggcactttagaccgtattccctccttccatc 360
           ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 242 cagctttaaagcaaggacac---cttcatggcactttagaccgtattccctccttccatc 186

                                                                       
Query: 361 cttcctttacttccttcttccttccttcctttctgctttctttccttccctcccccttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cttcctttacttccttcttccttccttcctttctgctttctttccttccctcccccttct 126

                                                                       
Query: 421 ttccttttcctctcctcccctcctccctcccttcctctcctcctccatctctcccttccc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttccttttcctctcctcccctcctccctcccttcctctcctcctccatctctcccttccc 66

                                           
Query: 481 tcctccctccctccctcccaacttccctccct 512
           |    ||||||||||||||    |||||||||
Sbjct: 65  t----cctccctccctccc----tccctccct 42


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1073
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1063
Effective search space:   707958
Effective search space used:   707958
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)