Query= MSMg01no506_p03.b1 MSMg01no506_p03.b1 CHROMAT_FILE:
MSMg01no506_p03.b1 PHD_FILE: MSMg01no506_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:18 2005
(676 letters)
>mm_chr8_94999121_95000196
Length = 1076
Score = 1183 bits (612), Expect = 0.0
Identities = 648/660 (98%), Gaps = 1/660 (0%)
Strand = Plus / Minus
Query: 5 gaattcctaaga-ttgcgtgttttcacgaagcaaccctgggcctacaggtaaacacagcc 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 660 gaattcctaagacatgtgtgttttcacgaagcaaccctgggcctacaggtaaacgcagcc 601
Query: 64 gtgcttggtcttttacctaggtgttggcaaattaatctcaggtccttgtgtttgtatagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtgcttggtcttttacctaggtgttggcaaattaatctcaggtccttgtgtttgtatagc 541
Query: 124 aaatgttttagccactaagctatctctctggccccagagtagtaagtctgagcaagaatt 183
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 540 aaatgttttagccactaagccatctctctggccccagagtagtaagtctgaacaagaatt 481
Query: 184 tcacaggagcgaaacacgaggatagacctcatgagtcagaatgatgcaaaccgaacttca 243
||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 480 tcacaggagcgaaacacaaggatagacctcatgtgtcagaatgatgcagaccgaacttct 421
Query: 244 agagaggcaagaggagcagacgtcaggcaagatgttgtcgggagcagtggcattagcatt 303
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 420 agagaggcaagaggagcagacgtcaggcaagatggagtcgggagcagtggcattagcatt 361
Query: 304 agcaaccttcctaatgctgtgaccctttaatacagttgctcatgctgtggtgacacccca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agcaaccttcctaatgctgtgaccctttaatacagttgctcatgctgtggtgacacccca 301
Query: 364 accttaaaattgtttcattgctacttcatatctgtaattttattgctgttatgaatcata 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 accttaaaattgtttcattgctacttcatatctgtaattttattgctgttatgaatcata 241
Query: 424 atgcaaaatatcttatatgcaggatatctgacatgggaccccaaaggggtcatgacctac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 atgcaaaatatcttatatgcaggatatctgacatgggaccccaaaggggtcatgacctac 181
Query: 484 agattgagaggtctagagaaatgttccttaaactcctttcacacaggatccctttgcacc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agattgagaggtctagagaaatgttccttaaactcctttcacacaggatccctttgcacc 121
Query: 544 tgagaaatagtacacaactctagatatatgagtgcatgaagtagacacacaaataaaaca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgagaaatagtacacaactctagatatatgagtgcatgaagtagacacacaaataaaaca 61
Query: 604 tttactgttgataaaccataaagagacctactttaaaacaattttgacacacatatgaat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tttactgttgataaaccataaagagacctactttaaaacaattttgacacacatatgaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_p03.g1 MSMg01no506_p03.g1 CHROMAT_FILE:
MSMg01no506_p03.g1 PHD_FILE: MSMg01no506_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:18 2005
(601 letters)
>mm_chr8_94802370_94803370
Length = 1001
Score = 1162 bits (601), Expect = 0.0
Identities = 601/601 (100%)
Strand = Plus / Plus
Query: 1 ctggctgaagcacatatgttgataaaactgccgcttttggagaagctttaaaaagtcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggctgaagcacatatgttgataaaactgccgcttttggagaagctttaaaaagtcttt 260
Query: 61 gaagagtgatttcttaatagagctggaagagaagatacctgccatccacactgtcagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagagtgatttcttaatagagctggaagagaagatacctgccatccacactgtcagcct 320
Query: 121 gtggggcttctggctctggctagcacagcgcccaaaccagtgaggacaggactgtttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggggcttctggctctggctagcacagcgcccaaaccagtgaggacaggactgtttcaa 380
Query: 181 caagggccatggggtcctccacctgctttattctttgttcatttgctggctcattcattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagggccatggggtcctccacctgctttattctttgttcatttgctggctcattcattc 440
Query: 241 acttcattcattcattcactcagtactcacttcattcattcatttattcattcacaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttcattcattcattcactcagtactcacttcattcattcatttattcattcacaaatc 500
Query: 301 tgaggcaaacccctcagtgatatgcccagagtggatacagagagtagtattaagtaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaggcaaacccctcagtgatatgcccagagtggatacagagagtagtattaagtaaagt 560
Query: 361 tcacagaaaagtataaacagaaatattggtggatcaaaaaaatacagacgttgtacgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcacagaaaagtataaacagaaatattggtggatcaaaaaaatacagacgttgtacgttt 620
Query: 421 tcttttctatgtgccatgtacatgcaaacagacaaacaaacacacacacatacatacata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttttctatgtgccatgtacatgcaaacagacaaacaaacacacacacatacatacata 680
Query: 481 catacatacatacatgtatatgtgtatgtacatatatacatacatatatacacatatata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catacatacatacatgtatatgtgtatgtacatatatacatacatatatacacatatata 740
Query: 541 tgtatacatacatgtatgtgtgtatgtatgtatgtatgtacatatatctcatgacatgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtatacatacatgtatgtgtgtatgtatgtatgtatgtacatatatctcatgacatgaa 800
Query: 601 g 601
|
Sbjct: 801 g 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
