Query= MSMg01no510_o13.b1 MSMg01no510_o13.b1 CHROMAT_FILE:
MSMg01no510_o13.b1 PHD_FILE: MSMg01no510_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:36 2005
(349 letters)
>mm_chr8_101525990_101526738
Length = 749
Score = 507 bits (262), Expect = e-148
Identities = 331/376 (88%), Gaps = 37/376 (9%)
Strand = Plus / Plus
Query: 7 actgagtcatctcagcttccaggtcttgcattattaaacaatctgagtggtcttctttgt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 actgagtcatctcagcttccaggtcttgcattattaaacaatctgagtggtcttctttgt 237
Query: 67 ggaataatccaatgttaaa----------------------------aaaaa-aaatcct 97
|||||||| |||| ||||| ||||| |||||||
Sbjct: 238 ggaataatgcaatattaaaacaaacaaacaaacaaacaaacaaaaacaaaaacaaatcct 297
Query: 98 tgtagtgaaggcaccttgggctaaggtctatttctgaaacaagaataacagtaatagaaa 157
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 298 tgtagtgaaggcaccttgggctgaggtctatttctgaaacaagaataacagtaatagaaa 357
Query: 158 ttttcaaaaacctccttatacttaattccatctagttgtggagacagaaatacctaagtg 217
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atttcaaaaacctccttatacttaattccatctagttgtggagacagaaatacctaagtg 417
Query: 218 acctaaaacaacaaatgactt----tttttaaaatctggacaagatcaatgggacaataa 273
|| |||||||||||||||||| | ||||||| |||||||||||||| |||||||
Sbjct: 418 acttaaaacaacaaatgacttcaggt----aaaatctagacaagatcaatggcacaataa 473
Query: 274 tagagaagaataataataaggcaggcttgggtgagatggtagatatgttgaaatgtaaat 333
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tagaggagaataataataaggcaggcttgggtgagatggtagatatgttgaaatgtaaat 533
Query: 334 gacaagagggaaccaa 349
||||||||||||||||
Sbjct: 534 gacaagagggaaccaa 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_o13.g1 MSMg01no510_o13.g1 CHROMAT_FILE:
MSMg01no510_o13.g1 PHD_FILE: MSMg01no510_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:37 2005
(632 letters)
>mm_chr8_101681532_101682563
Length = 1032
Score = 1145 bits (592), Expect = 0.0
Identities = 622/632 (98%)
Strand = Plus / Minus
Query: 1 agggcaacaatgatatactagaatatagggtaccttacagtcttcagatgttcatgatct 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 832 agggcaacaatgatatactagaatatagggtaccttagagtcttcagatgttcatgatct 773
Query: 61 tcaagctaaaatattgttataataacagaaagacatactttgtcctttatactatccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 tcaagctaaaatattgttataataacagaaagacatactttgtcctttatactatccagt 713
Query: 121 tagtgacagaagttaggaatctccatagttctcatatacatggttcaggttggtaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tagtgacagaagttaggaatctccatagttctcatatacatggttcaggttggtaaaatt 653
Query: 181 gctgaatggctaataatgtataaatttgttcattcttgacattttttaatttaatccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 652 gctgaatggctaataatgtataaatttgttcattcttgacattttttaaacaaaaccatt 593
Query: 241 ttaattaccaatgggatgaaaatgaaaatgtataccacaataagaaaatcatttatggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ttaattaccaatgggatgaaaatgaaaatgtataccacaataagaaaatcatttatggat 533
Query: 301 aaatgctttagcattcctcaattattttatgtgggcaaaagggtctcaaaaaacaaagtt 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aaatgctttagcattcttcaattattttatgtgggcaaaagggtctcaaaaaacaaagtt 473
Query: 361 ttgagaactgctaccttaggaaggcatttattaactaaagtcatttgaggtaattagttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttgagaactgctaccttaggaaggcatttattaactaaagtcatttgaggtaattagttt 413
Query: 421 gaaatattgttgcaaagcacatttccacacttaaaaaaagtgtcacttttaaaatgtggg 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 412 gaaatattgttgcaaagcacatttccacactttaaaaaagtgtcacttttaaaatgtggg 353
Query: 481 ttttatattgatagaagtgcatgtgtccttaatatgattttgggtacagagtatggacag 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 352 ttttatattgatagaagtgcatgtgtccttaatatgattttgggtatagagtatggacag 293
Query: 541 ggtttgtatatgaaagatcctcttcagaattaggtattaaatgcttgactttcaactggt 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggtttgtatatgaaagatcctcctcagaattaggtattaaatgcttgactttcaactggt 233
Query: 601 ggacctatttagggcattctggaaatattaga 632
||||||||||||||||||||||||||||||||
Sbjct: 232 ggacctatttagggcattctggaaatattaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
