Query= MSMg01no511_p07.b1 MSMg01no511_p07.b1 CHROMAT_FILE:
MSMg01no511_p07.b1 PHD_FILE: MSMg01no511_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:57 2005
(515 letters)
>mm_chr8_100765635_100766545
Length = 911
Score = 849 bits (439), Expect = 0.0
Identities = 492/515 (95%), Gaps = 14/515 (2%)
Strand = Plus / Plus
Query: 2 attattttttcttacaatacatttcaactagattcccctccaaattttaatgggactggt 61
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 202 attattttttcatacaatacatttcaactagattcctctccaaattttaatgggactggt 261
Query: 62 tttgtatacaggtacatatgatatttttacattgaatccatcaataagaaactttgaa-t 120
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 262 tttgtatacaggtacatatgataattttacattgaatccatcaataagaaactttgaatt 321
Query: 121 ttcaactaggcactatgtgattgcaactgcatacctagataactaaatataatgatatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttcaactaggcactatgtgattgcaactgcatacctagataactaaatataatgatatta 381
Query: 181 atacctagagattatataatatgtgaacactattagttagagtggcagaatgtaatttat 240
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 382 atacctagagattatataataaatgaacacta----ttagagtggcagaatgtaatttat 437
Query: 241 gcaatattatttttacaactttgtttatttttcctcttttttccttctctctctgtctct 300
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 438 gcaata-tatttttacaactttgtttatttttcctcttgtttccttctctctctg--tct 494
Query: 301 ctctctgtctctctttgtctctctgtctctctctctgtctctgcccctgtctctgtctct 360
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 495 ctctctgtctctctttgtctctctgtctctctctctgtctct----c--tctctgtctct 548
Query: 361 gtctctccctctctctctttctgtctcttagactccatctcactactctgtagccccata 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctctctccctctctctctttctgtctcttagactccatctcactactctgtagccccata 608
Query: 421 tggtcttcaacttgttgtgtaatccagactggcctctgaacatttagttggtatctcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tggtcttcaacttgttgtgtaatccagactggcctctgaacatttagttggtatctcaaa 668
Query: 481 tgaagaaaaccttgattctgattatgcttttacca 515
|||||||||| |||||||||||||| |||||||||
Sbjct: 669 tgaagaaaactttgattctgattatacttttacca 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 911
Length adjustment: 10
Effective length of query: 505
Effective length of database: 901
Effective search space: 455005
Effective search space used: 455005
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_p07.g1 MSMg01no511_p07.g1 CHROMAT_FILE:
MSMg01no511_p07.g1 PHD_FILE: MSMg01no511_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:57 2005
(516 letters)
>mm_chr8_100920559_100921474
Length = 916
Score = 837 bits (433), Expect = 0.0
Identities = 454/461 (98%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 57 acctgtttt-aaacatgttatttttaaaaatattttgtaattaggtattttcttcattta 115
||||||||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 916 acctgttttaaaacatgttcttttaaaaaatgttttgtaattaggtattttcttcattta 857
Query: 116 cctttccaatgctaacccaaaagttccatataccctcccctgaaaccccctacccaccca 175
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 856 cctttccaatgctatcccaaaagttccatataccctcccccgaaaccccctacccaccca 797
Query: 176 ctcccacttcttggccctggcgttcccctgtactgaggcatatgaagtttgcaagaccaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ctcccacttcttggccctggcgttcccctgtactgaggcatatgaagtttgcaagaccaa 737
Query: 236 tgggcttctctttccactgagtagaaacatgttctttttaaaagccacgatttaaataac 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tgggcttctctttccactgagtagaaacatgttctttttaaaagccacgatttaaataac 677
Query: 296 taagaaaaccctaaaatctttcatgttcaattatttgttcaacataaatgtaaatatttt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 taagaaaaccctaaaatctttcatgttcaattatttgttcaacataaatgtaaatatttt 617
Query: 356 tatttttttcttttcttccaatgataatatattaattaccttaattttacctgtgtgaat 415
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 616 tatttttttcttttcttccaatgataatatattaattgccttaattttacctgtgtgaat 557
Query: 416 tattcaggttacaattatcagagatagaattgttttttaagtttagggtgcataaaactc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tattcaggttacaattatcagagatagaattgttttttaagtttagggtgcataaaactc 497
Query: 476 attatgtacatgagttcacaaatatttcattttatacacac 516
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 attatgtacatgagttcacaaatatttcattttatacacac 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
