Query= MSMg01no513_c10.b1 MSMg01no513_c10.b1 CHROMAT_FILE:
MSMg01no513_c10.b1 PHD_FILE: MSMg01no513_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:33 2005
(708 letters)
>mm_chr8_86567037_86568145
Length = 1109
Score = 1326 bits (686), Expect = 0.0
Identities = 689/690 (99%), Gaps = 1/690 (0%)
Strand = Plus / Minus
Query: 20 gcagactgtttagtgtggctggagcagcaggaggccaatcaggagagtgcagctccttag 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 gcagactgtttagtgtggctggagcagcaggaggccaatcaggagagtgcagctccttag 1038
Query: 80 aggcgagacaaaagaggcgacacagtgggcttgggagactgtgattagaatcccaacact 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 aggcgagacaaaagaggcgacacagtgggcttgggagactgtgattagaatcccaacact 978
Query: 140 ctgggaagctgaggcaggatggtcatgaactcaaggacagcctaagaccctgtctcaaaa 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 ctgggaagctgaggcaggatggtcatgaactcaaggacagcctaagaccctgtctcaaaa 918
Query: 200 aaaaaaaaatcgcaaaaccaaaaaacggagtggaggaggaggaagaagatgatgatgaaa 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 aaaaaaaaatcgcaaaaccaaaaaacggagtggaggaggaggaagaagatgatgatgaaa 858
Query: 260 gagagatgtgtgggtggtgaatgatggacagacagatggatgcatgcgcaggttaggagt 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gagagatgtgtgggtggtgaatgatggacagacagatggatgcatgcgcaggttaggagt 798
Query: 320 gtgcctgcctcaaaacagtagctctatggctaaatggctgtgtcctcacacaagcctgat 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gtgcctgcctcaaaacagtagctctatggctaaatggctgtgtcctcacacaagcctgat 738
Query: 380 gaggagccagggtcccaattagtgaatagtaagtaggtggcaacagcagcaaactcagta 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gaggagccagggtcccaattagtgaatagtaagtaggtggcaacagcagcaaactcagta 678
Query: 440 gctgtcactgagaggctggaagaagtgaattcggtaaagcaaacaagacggtcaataaat 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gctgtcactgagaggctggaagaagtgaattcggtaaagcaaacaagacggtcaataaat 618
Query: 500 gatcagtgttcacttgagtgctcctcatgtatcccatagtattgtgcttttgcgggcatc 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gatcagtgttcacttgagtgctcctcatgtatcccatagtattgtgcttttgcgggcatc 558
Query: 560 cagtctgatactcctgacaaagcc-aaaaaaaaaaaagtagaagttattattatctcccc 618
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 557 cagtctgatactcctgacaaagccaaaaaaaaaaaaagtagaagttattattatctcccc 498
Query: 619 tccccctcccctgctttgtggaaaagaaaactgagcctaggagggagacggaagtaatgt 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tccccctcccctgctttgtggaaaagaaaactgagcctaggagggagacggaagtaatgt 438
Query: 679 catttactattctgatttagggagcctagc 708
||||||||||||||||||||||||||||||
Sbjct: 437 catttactattctgatttagggagcctagc 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1109
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1099
Effective search space: 767102
Effective search space used: 767102
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no513_c10.g1 MSMg01no513_c10.g1 CHROMAT_FILE:
MSMg01no513_c10.g1 PHD_FILE: MSMg01no513_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:33 2005
(642 letters)
>mm_chr8_86400245_86401286
Length = 1042
Score = 1241 bits (642), Expect = 0.0
Identities = 642/642 (100%)
Strand = Plus / Plus
Query: 1 tgggcaatgtgagactgggggttgagggtagcgtctggaaatctgccttgaagtgtccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggcaatgtgagactgggggttgagggtagcgtctggaaatctgccttgaagtgtccca 260
Query: 61 ggaccttgttggcttggcctggacaaagcagtaccgtccttttagctctgctggcctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaccttgttggcttggcctggacaaagcagtaccgtccttttagctctgctggcctctg 320
Query: 121 gaacccaactccgggctcctcccagcctgcagctgctagttctggtagcttgggttcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacccaactccgggctcctcccagcctgcagctgctagttctggtagcttgggttcact 380
Query: 181 tccaagcttcactgatttggggggcggggcagggggaacctcaggcagctcagagcctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaagcttcactgatttggggggcggggcagggggaacctcaggcagctcagagcctca 440
Query: 241 gtttccctgtcaagcgattcatcaagatgatgggatatgcctgtgatcccaacaccagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttccctgtcaagcgattcatcaagatgatgggatatgcctgtgatcccaacaccagaa 500
Query: 301 ggctaaagcaagaggattgtgagctctaggccggcttgggctccagagtgaaaacatgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggctaaagcaagaggattgtgagctctaggccggcttgggctccagagtgaaaacatgtc 560
Query: 361 tggaaaaaaagcaaacaaaaagggtccttacaaaatgtcaggtggctcttgagctgcgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggaaaaaaagcaaacaaaaagggtccttacaaaatgtcaggtggctcttgagctgcgga 620
Query: 421 gagacggtcacagacgcacagcgggtatttacttaggcttattacccccaccgcaggatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagacggtcacagacgcacagcgggtatttacttaggcttattacccccaccgcaggatc 680
Query: 481 ccctcccctcacgcaccccagatgcgtcattcagcacgggctctctgcttgctggtgtcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccctcccctcacgcaccccagatgcgtcattcagcacgggctctctgcttgctggtgtcc 740
Query: 541 cctgctggctggccttccttatagttaggtttgtgttcaatgtctccttcagaaaagacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctgctggctggccttccttatagttaggtttgtgttcaatgtctccttcagaaaagacc 800
Query: 601 tcctggctgcctagttagcagtacctcaacggctgtccctgt 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcctggctgcctagttagcagtacctcaacggctgtccctgt 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
