XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAGCT
GTATTACAATCCAGATGTTCTAAGATGATTTGGGGGGGATGCCAAAAGGA
TGCCAGATTTTTACAAAGACCTGCCAAGTCTTGATGTGTGCTCCTTAGGA
ACCATTCTGGAAGAGATGCTGGGAAGTGCACCCCCCCCCGCCACTCCCCC
TCCACCCCCCCCAAAGCAAGATATTCGTGAGAAAGGGAGGAAGACAGAGT
TGGGTGGACAGAGGAGCTGAGCCTCAATGTTGTCTCCACTGAGGTCTAAG
CCAGTTCTACAGGAGCTGGGGAGGCTCCAAACTGTGAGGAGGGGGTCCTT
AGTACCACCTGTGTCAGCTTTACTCACTACAGGCTCTCATCTAAGACAGT
GGTTGGAGTTTTAACACAGCTCCTCCTGTTGTGAGGACTCTCAACCATAA
AATTATCTTGTTGCGGTTCTCTCGACAGCTGTCCCTCTTTATAAGTTGGC
ACTCCATAAGGATGAAGCCATGTTCAGCTCCAGTGCCAAGACTGTGAAGC
CAAATGGGGAGAAGCCGGATGAGTTCCAAGTCTGGCATCTCTCAGGTGCT
GCTCGAGCTGGAGATGAACGCAGATGTCAAGGCTCTGCTGCAGGAAGTCA
ACATCACCACAACCAAGTAAATTGAAGTTGGTGGTGGTCGGAAAGCTACC
ATAATTTTTGTACCAGTTCCTCAGCTTTTAATCTTTCCAGAAAATTCATG
TCAAGCTAGTTCGTGAATTG

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCAAATTAACATCCTTGCCTGTGGGCTTCTTGTACAC
ACCAGAAAAAGTTCCAACCTTGTGCTCCTAATTGTTCTGCTGTGCTTTGT
CTAAATGAACTTTTATGAGCTGGCTGCCATCCAGTTTCACACAGATCCTC
TACCCACAATTTCACTTGGGAAGACCAAGTCTGCTGTCATGCACTACTGT
CAGGGTGTGGTTTCTGGGGCGCTTCTGCTTATTTTTCGTACGGATTTTCC
AGGTTGGCTTGGGCAGAATCCTCCTCTGAGCAATGAACACAACTTGCTTC
CCACTGAATTTTTTCTCCAATTCACGAACTAGCCTGACATGAATTTTCTG
GAAAGACTTAAAGCTGAGGAACTGGTACAAAAATTATGGTAGCTTTCCGA
CCACCACCAACTTCAATTTCCTTGGTTGTGGTGATGTTGACTTCCTGCAG
CAGAGCCTTGACATCTGCGTTCATCTCCAGCTCGAGCAGCACCTGAGAGA
TGCCAGACTTGGAACTCATCCGGCTTCTCCCCATTTGGCTTCACAGTCTT
GGCACTGGAGCTGAACATGGCTTCATCCTTACGGAGTGCCAACTTATAAA
GAGGGACAGCTGTCGAGAGAACTGCAACAAGATAATTTTATGGTTGAGAG
TCCTCACAACAGGAGGAGCTGTGTTAAAACTCCAACCACTGTCTTATATG
AGAGCCTGTAGTGA

Query= MSMg01no514_d21.b1 MSMg01no514_d21.b1 CHROMAT_FILE:
MSMg01no514_d21.b1 PHD_FILE: MSMg01no514_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:03 2005
         (621 letters)



>mm_chr8_19975974_19976994
          Length = 1021

 Score = 1106 bits (572), Expect = 0.0
 Identities = 607/620 (97%), Gaps = 4/620 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcagctgtattacaatccagatgttctaagatgatttgggggggatgccaaaa 63
           ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcagctgtaaaagaatccagatgttctaagatgatttgggggggatgccaaaa 263

                                                                       
Query: 64  ggatgccagatttttacaaagacctgccaagtcttgatgtgtgctccttaggaaccattc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggatgccagatttttacaaagacctgccaagtcttgatgtgtgctccttaggaaccattc 323

                                                                       
Query: 124 tggaagagatgctgggaagtgcacccccccccgccactccccctccacccc--ccccaaa 181
           |||||||||||||||||||||||  ||||||||||||||||||||||||||  |||| ||
Sbjct: 324 tggaagagatgctgggaagtgca--cccccccgccactccccctccaccccctcccccaa 381

                                                                       
Query: 182 gcaagatattcgtgagaaagggaggaagacagagttgggtggacagaggagctgagcctc 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gcaagatattcgtgagaaagggaggaagacagagttgggtggacagaggagctgagcctc 441

                                                                       
Query: 242 aatgttgtctccactgaggtctaagccagttctacaggagctggggaggctccaaactgt 301
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aatgttgtagccactgaggtctaagccagttctacaggagctggggaggctccaaactgt 501

                                                                       
Query: 302 gaggagggggtccttagtaccacctgtgtcagctttactcactacaggctctcatctaag 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gaggagggggtccttagtaccacctgtgtcagctttactcactacaggctctcatctaag 561

                                                                       
Query: 362 acagtggttggagttttaacacagctcctcctgttgtgaggactctcaaccataaaatta 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 acagtggttggagttttaacacagctcctcctgttgtgaggactctcaaccataaaatta 621

                                                                       
Query: 422 tcttgttgcggttctctcgacagctgtccctctttataagttggcactccataaggatga 481
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 622 tcttgttgcggttctctcgacagctgtccctctttataagttggcactccgtaaggatga 681

                                                                       
Query: 482 agccatgttcagctccagtgccaagactgtgaagccaaatggggagaagccggatgagtt 541
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agccatgttcagctccagtgacaagactgtgaagccaaatggggagaagccggatgagtt 741

                                                                       
Query: 542 ccaagtctggcatctctcaggtgctgctcgagctggagatgaacgcagatgtcaaggctc 601
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 742 ccaagtctggcatctctcaggtgctgcttgagctggagatgaacgcagatgtcaaggctc 801

                               
Query: 602 tgctgcaggaagtcaacatc 621
           ||||||||||||||||||||
Sbjct: 802 tgctgcaggaagtcaacatc 821


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)