NNNNCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGGTACAACTGTCCGGCACAGCTCCTTGCTTCTGTCACAG
GGTCAGACACAGGACATGAGTAGCCACTCAATGCAGACGTAAGCAAAGAT
CCCAAGGGAGGACCCAAGTTCACTGCAGACCCTGGCAATGATGCTAGACA
GAGAAGAAGCACCCACACCCTGGAACACAGGATCTAGGAAGAAAGCCAGC
AGCTGCCATGACAACAGCTTCCCAAGACCCAAGCTAGTATGTAGGAAGCC
AGCAGAGGAAAGGAAAAAGAGAGAGAAAAAGGACAAAATCTTCCAGGCAG
GAAGCTAATAGACTACAGACAAGCAGGAAGATGCACGGTGAGACTCTGTA
GGGCACAAGACACTTTCCCAGGCACCTGATGAAGTAATGACCCAGTTCCC
TAAGACTAAACAGTCTAGGAGTGCTTCTCAACCTTCCTAATGCTGCAACC
CTTCAATACAGTTCCTCATGTGTGGTGACCCCAACATAAAGCTGTTTACT
TTGCTACTCCGTTAACTGTAATCTCGCTGCTGTTCTGAATCACAATATAA
ATATCCGATCTGCAGGACATCTTAAGTGCAACCCCCAAAGAGATGACAAT
CCCCAAGTTAGCCTGCAACCAAAAGCACTTCACAGAATGAGAGCTTAAGG
GAATCAACAGAGGGATGTGAGCACTCTCAGAAGACCAGCAAGGTCATGAG
GAGCAAGGGGAGCCTGANGTCTATCAGAGCTGAA

NACACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAGCTTTGGTAGTTGTTGTTT
TGGGTTGGGGTGGGTGAGAAAGAACTTAAAGTTGGGTAAGTAAGGAGTAG
GGAAGGATCAGGAAAGATTTGGATTAGGGAAACAATATGATCAAAATATG
CAGAAGTTTAAAGATTGTTTTGAAGTACAGAATCCTTTGGGATGGCTTCT
AGTTTGAGACAGCTTCTTTTAAGGGTGGTGGATAGATAATATGTCAGTAT
TTAATTGATTTAAAAAGTATTATTTTTCCGTATTAAATCTATTTTTTTAG
AGTTATATGTCCTGTTCTGCTCATTGTCTGAGTTCAACAAGCTCTGTGCT
TCCTTCATACCAAACCCTTTCACCACCCCCTACTGTCTGATATTTATGGT
TCTGAAATACAATTTTAGGTTTTGTTACCTTTGAATTGGTATAAATTGGA
GCTATTCTGAAATTTTATTCATTGCTCCAAATTAATTTTGATTTGAGATC
AATGGATAGTCTCTATAATATTTATCAGTCACTTCCAGGATAATGTTTTG
TTTCTATAAGAAAATAAAGCCTATTTGCAAATAAATTTTAATGAAAAAAA
TTGAAAATCTCCCCATTATTTAAGTTCTGTTAACATTTTCTCCCAATTTC
TGCATCATTCACTAATGCTCATTTTTTTTTAACCAAATTATTTGAGTTTT
ACTGG

Query= MSMg01no515_p19.b1 MSMg01no515_p19.b1 CHROMAT_FILE:
MSMg01no515_p19.b1 PHD_FILE: MSMg01no515_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:32 2005
         (589 letters)



>mm_chr6_94020509_94021497
          Length = 989

 Score = 1108 bits (573), Expect = 0.0
 Identities = 582/585 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaggtacaactgtccggcacagctccttgcttctgtcacagggtcagacacagga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggtacaactgtccggcacagctccttgcttctgtcacagggtcagacacagga 264

                                                                       
Query: 65  catgagtagccactcaatgcagacgtaagcaaagatcccaagggaggacccaagttcact 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catgagtagccactcaatgcagacgtaagcaaagatcccaagggaggacccaagttcact 324

                                                                       
Query: 125 gcagaccctggcaatgatgctagacagagaagaagcacccacaccctggaacacaggatc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcagaccctggcaatgatgctagacagagaagaagcacccacaccctggaacacaggatc 384

                                                                       
Query: 185 taggaagaaagccagcagctgccatgacaacagcttcccaagacccaagctagtatgtag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taggaagaaagccagcagctgccatgacaacagcttcccaagacccaagctagtatgtag 444

                                                                       
Query: 245 gaagccagcagaggaaaggaaaaagagagagaaaaaggacaaaatcttccaggcaggaag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaagccagcagaggaaaggaaaaagagagagaaaaaggacaaaatcttccaggcaggaag 504

                                                                       
Query: 305 ctaatagactacagacaagcaggaagatgcacggtgagactctgtagggcacaagacact 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctaatagactacagacaagcaggaagatgcacggtgagactctgtagggcacaagacact 564

                                                                       
Query: 365 ttcccaggcacctgatgaagtaatgacccagttccctaagactaaacagtctaggagtgc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcccaggcacctgatgaagtaatgacccagttccctaagactaaacagtctaggagtgc 624

                                                                       
Query: 425 ttctcaaccttcctaatgctgcaacccttcaatacagttcctcatgtgtggtgaccccaa 484
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttctcaaccttcctaacactgcaacccttcaatacagttcctcatgtgtggtgaccccaa 684

                                                                       
Query: 485 cataaagctgtttactttgctactccgttaactgtaatctcgctgctgttctgaatcaca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cataaagctgtttactttgctactccgttaactgtaatctcgctgctgttctgaatcaca 744

                                                        
Query: 545 atataaatatccgatctgcaggacatcttaagtgcaacccccaaa 589
           ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 745 atataaatatctgatctgcaggacatcttaagtgcaacccccaaa 789


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no515_p19.g1 MSMg01no515_p19.g1 CHROMAT_FILE:
MSMg01no515_p19.g1 PHD_FILE: MSMg01no515_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:32 2005
         (369 letters)



>mm_chr8_43539866_43540634
          Length = 769

 Score =  683 bits (353), Expect = 0.0
 Identities = 365/369 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atttttccgtattaaatctatttttttagagttatatgtcctgttctgctcattgtctga 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atttttccatattaaatctatttttttagagttatatgtcctgttctgctcattgtctga 510

                                                                       
Query: 61  gttcaacaagctctgtgcttccttcataccaaaccctttcaccaccccctactgtctgat 120
           |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||
Sbjct: 509 gttcaacaagctctgtgcttccttcataccaaaccctttcaggaccctctactgtctgat 450

                                                                       
Query: 121 atttatggttctgaaatacaattttaggttttgttacctttgaattggtataaattggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atttatggttctgaaatacaattttaggttttgttacctttgaattggtataaattggag 390

                                                                       
Query: 181 ctattctgaaattttattcattgctccaaattaattttgatttgagatcaatggatagtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctattctgaaattttattcattgctccaaattaattttgatttgagatcaatggatagtc 330

                                                                       
Query: 241 tctataatatttatcagtcacttccaggataatgttttgtttctataagaaaataaagcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tctataatatttatcagtcacttccaggataatgttttgtttctataagaaaataaagcc 270

                                                                       
Query: 301 tatttgcaaataaattttaatgaaaaaaattgaaaatctccccattatttaagttctgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tatttgcaaataaattttaatgaaaaaaattgaaaatctccccattatttaagttctgtt 210

                    
Query: 361 aacattttc 369
           |||||||||
Sbjct: 209 aacattttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space:   273600
Effective search space used:   273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)