NNNNNAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTACTGATCTGCACACTGAAAAACGAGGAAGATGCCAAA
CCTCACAGCTGTCCCTTTATAACTGGCTCAAACTCTGGTAATGAAGAATA
CGCTACACAACAGAACTTACGCTACCAGGTTTTGCAATTCCTCAGGAATG
GCCTGAGATTTCTATCTCAGTCCTTACTTTCTTACTGTTAGACCTGGGGC
AGAAATGAGTAGCAGAGATGGCCACATTCTCAGAACTGCTCTCTGCTGAC
CTGGGTATATAACCTTCCAGTAAATGTATTTACCTACACAGTTGGTAGCC
ATCCAAGATGCTATCCAAAGGGTCTGAGTCAGACCTGGGGTAACTTATTG
GGAACTGAGAAACATCAACACAGACACACCTTTTAAATATTTGGATCCTA
GAACTTGCTTCAAGAAATGTATGACAAATGAAGTTATGAGCAAAGTAATT
AATAAAATATCATAGAACATGTTAAGATTTAGCTGTAGGGAACTGAAGTT
CTAATTTAGTTAAATTTAAAAATATGATTAAATTTAAAACAAGTCTAATT
AAATATGAGGCTTAGATCATATTTTAACTTACATTACAAGGAAGATTGAG
CAACTTTCCCCCCAATGTCCAGGGACTGAACCTGGGCCTCTGCATGCTGG
CAGGTCTCTACCACAGAGGTACATCCCTAGCCTGACTAAAGTTTACCCG

NNNNNNCCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGATACATTGCTATCCCTT
GTGAGTGCCATCTACTTCGAAGGAAGCTGGAAGGAACAGTTCTACAGAGA
GGACACCAGGGAGATGCCATTCAAGTCAGCAAGGATGAGAAGAAACCTGT
GCAAATGAGGTTTAAGAAGTCTACCTTTAAGATGACCTATACTGGGGAGA
TCTTCACTAAGATTCTGTTGCTTCCCTATGTTGGCAATGAGCTGAACATG
ATCATCATGCTTCCAGATGAACATGTTGAACTGAGTACGGTGGAAAAGGA
AATAACTCATGAGAAATGTATAGAGTGAATGAGGCTGGACAAGATGGACG
AAGAAGAGGTGGAAGTATTTCTCCCCAAAGTTTAAGCTGGAGGAGAACTA
TGACATGAAGGATGTCTTCTGCAAGCTGGGCATGACTGATGCCTATGAGG
GCAGGGCAGACTTTTCTGAAATGTCTTCCAAGCAAGGTTTGTTTCTGTCT
AAGGTTGTGCATAAGGCCTTTGTGGAGGTCAATGAGGAGGGCACAGAGGC
TGCAGCTGCTCCAGCGGTCATCATGATGCTGAGGTGCATGAGGTTCACTC
CCCCCTTCTGTGCCTACTGCCCCTTCCTTTTCTTCATTCATCATGTTAAG
ACCGATGTGATTCTGTTCTGTGGCTCGTTCTCCTCTCCTGAGCAAGGGTG
TTCCTGTCAG

Query= MSMg01no516_k23.b1 MSMg01no516_k23.b1 CHROMAT_FILE:
MSMg01no516_k23.b1 PHD_FILE: MSMg01no516_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:31 2005
         (624 letters)



>mm_chr8_41679373_41680396
          Length = 1024

 Score = 1199 bits (620), Expect = 0.0
 Identities = 620/620 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctactgatctgcacactgaaaaacgaggaagatgccaaacctcacagctgtccct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctactgatctgcacactgaaaaacgaggaagatgccaaacctcacagctgtccct 264

                                                                       
Query: 65  ttataactggctcaaactctggtaatgaagaatacgctacacaacagaacttacgctacc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttataactggctcaaactctggtaatgaagaatacgctacacaacagaacttacgctacc 324

                                                                       
Query: 125 aggttttgcaattcctcaggaatggcctgagatttctatctcagtccttactttcttact 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggttttgcaattcctcaggaatggcctgagatttctatctcagtccttactttcttact 384

                                                                       
Query: 185 gttagacctggggcagaaatgagtagcagagatggccacattctcagaactgctctctgc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttagacctggggcagaaatgagtagcagagatggccacattctcagaactgctctctgc 444

                                                                       
Query: 245 tgacctgggtatataaccttccagtaaatgtatttacctacacagttggtagccatccaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgacctgggtatataaccttccagtaaatgtatttacctacacagttggtagccatccaa 504

                                                                       
Query: 305 gatgctatccaaagggtctgagtcagacctggggtaacttattgggaactgagaaacatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gatgctatccaaagggtctgagtcagacctggggtaacttattgggaactgagaaacatc 564

                                                                       
Query: 365 aacacagacacaccttttaaatatttggatcctagaacttgcttcaagaaatgtatgaca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aacacagacacaccttttaaatatttggatcctagaacttgcttcaagaaatgtatgaca 624

                                                                       
Query: 425 aatgaagttatgagcaaagtaattaataaaatatcatagaacatgttaagatttagctgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatgaagttatgagcaaagtaattaataaaatatcatagaacatgttaagatttagctgt 684

                                                                       
Query: 485 agggaactgaagttctaatttagttaaatttaaaaatatgattaaatttaaaacaagtct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agggaactgaagttctaatttagttaaatttaaaaatatgattaaatttaaaacaagtct 744

                                                                       
Query: 545 aattaaatatgaggcttagatcatattttaacttacattacaaggaagattgagcaactt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aattaaatatgaggcttagatcatattttaacttacattacaaggaagattgagcaactt 804

                               
Query: 605 tccccccaatgtccagggac 624
           ||||||||||||||||||||
Sbjct: 805 tccccccaatgtccagggac 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)