Query= MSMg01no517_c15.b1 MSMg01no517_c15.b1 CHROMAT_FILE:
MSMg01no517_c15.b1 PHD_FILE: MSMg01no517_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:09 2005
(377 letters)
>mm_chr8_91758988_91759764
Length = 777
Score = 679 bits (351), Expect = 0.0
Identities = 368/375 (98%), Gaps = 4/375 (1%)
Strand = Plus / Plus
Query: 5 gaattcctccttctcgatggtgacagaataaacagatctgtcactcacctctagattaga 64
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctccagctagatggtgacagaataaacagatctgtcactcacctctagattaga 264
Query: 65 gtttcttttgagtctcaaaaggaaaacaaaagaaaagatactagatgcactgattgttca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttcttttgagtctcaaaaggaaaacaaaagaaaagatactagatgcactgattgttca 324
Query: 125 tagatggggcagggagtggggggtggtgggaggggagggcagctgactcatacctctgtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagatggggcagggagtggggggtggtgggaggggagggcagctgactcatacctctgtc 384
Query: 185 agggaagggaacacatacacacacagtattaaacacacacacacacacacacacacacac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agggaagggaacacatacacacacagtattaaacacacacacacacacacacacacacac 444
Query: 245 acacacac--ttgctgccttcatacacacagtcatacacacacacagtcatgcacataca 302
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acacacacacttgctgccttcatacacacagtcatacacacacacagtcatgcacataca 504
Query: 303 cacacacacacacacacacacacacacacacacacacacacacacacttgctgccttcat 362
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 cacacacacacacacacacacacacacacacacacacacacacac--ttgctgccttcat 562
Query: 363 acacacagtcataca 377
|||||||||||||||
Sbjct: 563 acacacagtcataca 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 219
Number of extensions: 63
Number of successful extensions: 63
Number of sequences better than 10.0: 1
Number of HSP's gapped: 55
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_c15.g1 MSMg01no517_c15.g1 CHROMAT_FILE:
MSMg01no517_c15.g1 PHD_FILE: MSMg01no517_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:09 2005
(664 letters)
>mm_chr8_91917565_91918628
Length = 1064
Score = 1284 bits (664), Expect = 0.0
Identities = 664/664 (100%)
Strand = Plus / Minus
Query: 1 tttcctcctgttgggaacttggaatagattcaggatctatcgcacaatgtcagatgcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tttcctcctgttgggaacttggaatagattcaggatctatcgcacaatgtcagatgcatt 615
Query: 61 cttttgtatgtgacttaaaagagttggatgtcttctgtacatgtgtaattgtgtattgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cttttgtatgtgacttaaaagagttggatgtcttctgtacatgtgtaattgtgtattgaa 555
Query: 121 ttttgctttttatatgaaacgttgcttcagaaatactattcttgctctgatgttttaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttttgctttttatatgaaacgttgcttcagaaatactattcttgctctgatgttttaaag 495
Query: 181 gcccaacaatactctgtttctttcactaatgccggtccccatcctctggtgcattcttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gcccaacaatactctgtttctttcactaatgccggtccccatcctctggtgcattcttta 435
Query: 241 ctggatgctaacctctgtttcccaagtctaggctcaaaaccaaagtgtagtccactgaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctggatgctaacctctgtttcccaagtctaggctcaaaaccaaagtgtagtccactgaca 375
Query: 301 ctgactgtgtgacttggccactgtcaatgctcccggagcctcgtttccgcatgtagaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctgactgtgtgacttggccactgtcaatgctcccggagcctcgtttccgcatgtagaggt 315
Query: 361 tggtgctggttacacattgcagctcctttgtagtcatttggagaaaatgtacaaagtgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tggtgctggttacacattgcagctcctttgtagtcatttggagaaaatgtacaaagtgta 255
Query: 421 ggtgcgtactgggtaaacagcacagtaactgacctcgcagaatccttaccaacttagcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggtgcgtactgggtaaacagcacagtaactgacctcgcagaatccttaccaacttagcgg 195
Query: 481 ttatgagcacaggtttcggagctggactgccaggttcaaatcccagctttctcttgggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttatgagcacaggtttcggagctggactgccaggttcaaatcccagctttctcttgggca 135
Query: 541 agttaaaagagctgcctgggcctcactgcttaaatgtaaatgagagccataactgctctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 agttaaaagagctgcctgggcctcactgcttaaatgtaaatgagagccataactgctctg 75
Query: 601 ccctatggtctgtcttgaggactaaatgagctgatacgtgctcagagccatgtgtaatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 ccctatggtctgtcttgaggactaaatgagctgatacgtgctcagagccatgtgtaatac 15
Query: 661 acag 664
||||
Sbjct: 14 acag 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
