Query= MSMg01no517_p17.b1 MSMg01no517_p17.b1 CHROMAT_FILE:
MSMg01no517_p17.b1 PHD_FILE: MSMg01no517_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:15 2005
(697 letters)
>mm_chr8_117129286_117130382
Length = 1097
Score = 1245 bits (644), Expect = 0.0
Identities = 677/688 (98%)
Strand = Plus / Plus
Query: 10 ggaattccatcttatttcatcaggtaaatattcagggagctatgatagcatgttttaatc 69
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 210 ggaattccatcttaattcatcaggtaaatattcagggagctaagatagcatgttttaatc 269
Query: 70 tgaatcagtcttcagaaataccagatgaagtctttacttcagcttttctactgttccctg 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgaatcagtcttcagaaataccagatgaagtctttacttcagcttttctactgttccctg 329
Query: 130 tgttcattccgaatgtatccttcgcttaagggtcagagcccagtgttattttcaccagac 189
| ||||||| || |||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 330 ttttcattcagagtgtatccttcgcttaaggatcagagcccagtgttattttcagcagac 389
Query: 190 ttcagtgttggcctctttcagataaacagcacatttgcagttaattggctgaccatgctc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttcagtgttggcctctttcagataaacagcacatttgcagttaattggctgaccatgctc 449
Query: 250 cataattacattagaaccttcatgtgcttgaacagttgcccacagagggccagtcacatg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cataattacattagaaccttcatgtgcttgaacagttgcccacagagggccagtcacatg 509
Query: 310 gattaagttgtgtttctctcatcataacagagatggctggtggctgtcattgagcagtgg 369
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 510 gattaagttgtgtttctctcatcataacagagatggctggtggctgtcattgagcaatgg 569
Query: 370 agtcaggataagggacctgggactcatacagcgatttcctttcattcccaactgagatgg 429
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 agtcaggataaggggcctgggactcatacagcgatttcctttcattcccaactgagatgg 629
Query: 430 ctacctggagagttttagaagctgaccatgaaatctatgttctgtttggattcccaggtt 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ctacctggagagttttagaagctgaccatgaaatctatgttctgtttggattcccaggtt 689
Query: 490 tcatactatgggctaatacttcttcgaattttcagaaagcattggtttagcttttcatca 549
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 690 tcatactatgggctaatacttctttgaattttcagaaagcattggtttagcttttcatca 749
Query: 550 aagttatacagctgtgggttttgttgttgttattgttgcagttttttaacaacaacaaag 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 aagttatacagctgtgggttttgttgttgttattgttgcagttttttaacaacaacaaag 809
Query: 610 caaacctagtactttgtcaaggtggaattgagtttctaggaaaagtcaccaaagaaatgg 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 caaacctagtactttgtcaaggtggaattgagtttctaggaaaagtcaccaaagaaatgg 869
Query: 670 gcaagggaatgggccaaggcatttgaat 697
||| ||||||||||||||||||||||||
Sbjct: 870 gcaggggaatgggccaaggcatttgaat 897
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space: 746769
Effective search space used: 746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_p17.g1 MSMg01no517_p17.g1 CHROMAT_FILE:
MSMg01no517_p17.g1 PHD_FILE: MSMg01no517_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:15 2005
(649 letters)
>mm_chr8_117249499_117250548
Length = 1050
Score = 1210 bits (626), Expect = 0.0
Identities = 644/650 (99%), Gaps = 1/650 (0%)
Strand = Plus / Minus
Query: 1 acctttgtgtgaatatgacgcatctcacagtgacacttgctaatgctctttactcaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 acctttgtgtgaatatgacgcatctcacagtgacacttgctaatgctctttactcaaagg 791
Query: 61 ctggtaagaagacgttcctctgagagaataaaacaactaactgagccaacaggaaacatt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 790 ctggtaagaagatgttcctctgagagaataaaacaactaactgagccaacaggaaacttt 731
Query: 121 ctgtgctgtatctgctgaggagctttagtggaagatcccatcctgagagccttaacagga 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 730 ctgtgctgtatctgctgaggagctttggtggaagatcccatcctgagagccttaacagga 671
Query: 181 gatctaagaaaaggtgtggaaatgcctgttactgatgacagtgacacaaggaaacaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gatctaagaaaaggtgtggaaatgcctgttactgatgacagtgacacaaggaaacaaaag 611
Query: 241 gttcaggcgagcacatgaaaagtgcatgtatgcacacacgtgcactcagagggaatgcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gttcaggcgagcacatgaaaagtgcatgtatgcacacacgtgcactcagagggaatgcta 551
Query: 301 caagtcagccagaacatacttcgagtcccttgtatacagtggagattaatattgtaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 caagtcagccagaacatacttcgagtcccttgtatacagtggagattaatattgtaggat 491
Query: 361 gggtacacactgtgtgatgtttcaacatccaataaaccatccctccggtagtatcaccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gggtacacactgtgtgatgtttcaacatccaataaaccatccctccggtagtatcaccta 431
Query: 421 ccgcagtgcctgcagaaatgttgccagaccatgaggaacatgcatctttttttt-ctcca 479
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 430 ccgcagtgcctgcagaaatgttgccagaccacgaggaacatgcatctttttttttctcca 371
Query: 480 aacaatgcaagctaatcttcccaggggcgatctgtcaatgccaggagtgctaatttgata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aacaatgcaagctaatcttcccaggggcgatctgtcaatgccaggagtgctaatttgata 311
Query: 540 gctccgtcatcagatggcattgagaatttcattacatattttaagtcacgctaacatggt 599
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gctccgtcatcagatggcatcgagaatttcattacatattttaagtcacgctaacatggt 251
Query: 600 ttgctaatgctggaattcactaaaaggccacggctatttaaataacaaac 649
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttgctaatgctggaattcactaaaaggccacggctatttaaataacaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space: 664560
Effective search space used: 664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
