NAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTTACTTCTGAGCCCCATTTTTAATGGGGTTACTTGAT
TTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCC
CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTC
TTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTC
ATTAGGTCCCATTTGTCAATTCTCGATCTTACAGAGCAAGCCATTGCTGT
TCTGTTCAGGAATTTTTCCCCTGTACCCATATCTTCAAGGCTTTTCCCCA
CTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTG
ATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCG
CATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAA
TGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAG
TGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTG
GTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTG
CCCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTT
TTATCCTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTATTCN

NNCCAATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTGCTTGTATTATCAAACGG
TCAGCTTTAAGGCTGGGGATATAATCTGTAATACACGACAGAGATGATGT
CCAAGAATATATATTGCAATTTAATAGAAGTGATGGAAGACACCATCAAC
AGGACAGAGTTCTCTGAGTGAAGCTCACAGATAACCTGAAGATTATGTTG
TTGTGCTGAAGGAAAGAGAGAAATGATTGGAAATAAATATCTTAAAATGT
TTCAGATATTCTCATTCCAGTGTGTGTCTAAAATCTAATCCAGGTCAAAC
CTGAGTGATTTTACTTGAAAAGGTTAGAGAAGTAGGTAAGGTAAACATGG
TAAAATAAATCTTTTTTTTTTGACAGAGACACAAAAGTATATTGCTAAGT
ATTATGTAGAAACCAAGACAAAAATCTAGAGTATCTTAGGAGAAAAGGGT
AGCCATGTTAGCCTGCCTGACCTCCTATAGAAAAGTGGCAGCACAGTTAA
TGATAAATTACTGTGACTGCATCTGGGAGACCTTGTATGTGACTTTGCTT
TTATTAGTGTAATTATAGTTATTTTTTTCTACTGCATGTATTGTACCTGA
CTAACAACTGGACCTCACCAAAACAAACAAACAAACAAGCAAACAAACAA
ACAAATAACAGAAAGTGTCTCTGATCATGGAATGAAATGGTGCATGAATC
CCCACATGTGT

Query= MSMg01no518_l01.g1 MSMg01no518_l01.g1 CHROMAT_FILE:
MSMg01no518_l01.g1 PHD_FILE: MSMg01no518_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:10 2005
         (599 letters)



>mm_chr8_102566728_102567729
          Length = 1002

 Score = 1149 bits (594), Expect = 0.0
 Identities = 599/602 (99%), Gaps = 3/602 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcttgcttgtattatcaaacggtcagctttaaggctggggatataatctgtaatacacga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tcttgcttgtattatcaaacggtcagctttaaggctggggatataatctgtaatacacga 743

                                                                       
Query: 61  cagagatgatgtccaagaatatatattgcaatttaatagaagtgatggaagacaccatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cagagatgatgtccaagaatatatattgcaatttaatagaagtgatggaagacaccatca 683

                                                                       
Query: 121 acaggacagagttctctgagtgaagctcacagataacctgaagattatgttgttgtgctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 acaggacagagttctctgagtgaagctcacagataacctgaagattatgttgttgtgctg 623

                                                                       
Query: 181 aaggaaagagagaaatgattggaaataaatatcttaaaatgtttcagatattctcattcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaggaaagagagaaatgattggaaataaatatcttaaaatgtttcagatattctcattcc 563

                                                                       
Query: 241 agtgtgtgtctaaaatctaatccaggtcaaacctgagtgattttacttgaaaaggttaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agtgtgtgtctaaaatctaatccaggtcaaacctgagtgattttacttgaaaaggttaga 503

                                                                       
Query: 301 gaagtaggtaaggtaaacatggtaaaataaatc---ttttttttttgacagagacacaaa 357
           |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||
Sbjct: 502 gaagtaggtaaggtaaacatggtaaaataaatctttttttttttttgacagagacacaaa 443

                                                                       
Query: 358 agtatattgctaagtattatgtagaaaccaagacaaaaatctagagtatcttaggagaaa 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agtatattgctaagtattatgtagaaaccaagacaaaaatctagagtatcttaggagaaa 383

                                                                       
Query: 418 agggtagccatgttagcctgcctgacctcctatagaaaagtggcagcacagttaatgata 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agggtagccatgttagcctgcctgacctcctatagaaaagtggcagcacagttaatgata 323

                                                                       
Query: 478 aattactgtgactgcatctgggagaccttgtatgtgactttgcttttattagtgtaatta 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aattactgtgactgcatctgggagaccttgtatgtgactttgcttttattagtgtaatta 263

                                                                       
Query: 538 tagttatttttttctactgcatgtattgtacctgactaacaactggacctcaccaaaaca 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tagttatttttttctactgcatgtattgtacctgactaacaactggacctcaccaaaaca 203

             
Query: 598 aa 599
           ||
Sbjct: 202 aa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1002
Length adjustment: 10
Effective length of query: 589
Effective length of database: 992
Effective search space:   584288
Effective search space used:   584288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)