TTCTTACTCTCTATCCTCTTAACACGAGCGCAAAGACACATCGCATCATC
CACCAATGTAGGGNNNNNNCGAGGCGNNGGAGACCTAAAAAATTGCGGGC
CGTCTAAATACGACTCACTAAAATTCCAAGAGGGAGCCCGCGGGGAATTT
CAAGGTTGGAAATTTCCCCGGGAAAGAAACCCCCCCCCGGAAGGGCCCCG
GGGGTCCCCAACTTTTTGGGGCCCCCCGGGGGCAGGGGGGGGAGCTCCCA
CACTCCCCCCTAAAACAAAGGGGGTTTTTTTCCCCGGGGGGCCCGGAAGA
ACCCGGGGGGTGTAAACCCCCCTTGGGGGCCCGGGGGGGACCTCCCCCCC
CCGGGGGGGGAAAAAGAGAGGGCCCCCCCCCCCCCCCGCCCCCCAAAAAA
AAACCCCCACCCCCCTTTGGGGGCAACAAAGGGGGGTTAANAAGGTAAAA
CACCCCCCCCACCCAAAAAAGGGGGGGGGGTTCTTTGTGGGGGGGGGAAC
CCCCACCCCCCGGCGCCCANAAAGAAANAAAGAGGTGGGNTTCAGCCAAG
AGAAAAAGAGAAGAGGNGGCGGTGCGGGGGGGTCGGGCAGCGCCCTCCGC
CGGCGGGGCGGCGCCCNCAAGANNTAACGGGGGGGGGGGTTGTTGGTTTA
AAATATACANTTTTNNACACCCACACAAAAAAGAAAAGAGGGGGGGGGGG
GGGCAGACAAAACATAATTATTAAAAAATCCCCCCCCTCTCCTCTCTCCT
CGAAAGAAAAAAGAAGA

NNGGCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAATTGTTCCTATTCTTCTGTGT
TGCAAAGCGAATAATGCAGGTATCAAAATTGCTACTTGAGAAATTAATTT
AATTATTCTACATGGGATAAAATTTGATTCAGAATATTTTAAAAAATTCT
TTTTTACATAGTCATAGAAAGTTATTACTTAATTTCAAGTGTAGATCTGA
GATAAATAATACTTTATATGCTAATGGAAACTCTATAACCAGTCAGTAGA
GTTTGTTTATATTTTATGCACTTTTAAAATCAAACATTGGGGATATACAG
GAAACAAATATTGATAGGTGATAAAAATATTTAAGATCAAATACTCACTA
TCAAGTTAGGACTTCATTTAATGACAGATTCAGGGGTGGGGTTGGTAAGT
GGTTAGGACTCTACTCTTCTAGAGAACCCCATTTCATATCCTGGTATACA
AGTCAAGTGTACCACAACCACCTGGAACTGTCTCCTTAGTAATCTATGCT
CTCTTCTGGCCTTTGCTGTCACCTGCACAGATGTGAAATACATTCACACA
GACACATAAATGAAATGAAAAAAAATTAAAAATTATAAACTGTAAGATTT
ATTTCAAAGAATAAGAAAAATATGTGCATTGTGTTTTATTTTTGTGAATT
TCCTGGAGAAACTACATTTGCCATTTGTTTTGAGCTTAATTTGATAGTAT
TTTACN

Query= MSMg01no520_i20.g1 MSMg01no520_i20.g1 CHROMAT_FILE:
MSMg01no520_i20.g1 PHD_FILE: MSMg01no520_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:38 2005
         (668 letters)



>mm_chr8_6046655_6047722
          Length = 1068

 Score = 1268 bits (656), Expect = 0.0
 Identities = 665/668 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattgttcctattcttctgtgttgcaaagcgaataatgcaggtatcaaaattgctacttg 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 aattgttcctattcttctgtgttgcaaagcgaataatgcagttatcaaaattgctacttg 260

                                                                       
Query: 61  agaaattaatttaattattctacatgggataaaatttgattcagaatattttaaaaaatt 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 agaaattaatttaattattctacatgggataaaatttgattcagaatatttttaaaaatt 320

                                                                       
Query: 121 cttttttacatagtcatagaaagttattacttaatttcaagtgtagatctgagataaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttttacatagtcatagaaagttattacttaatttcaagtgtagatctgagataaata 380

                                                                       
Query: 181 atactttatatgctaatggaaactctataaccagtcagtagagtttgtttatattttatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atactttatatgctaatggaaactctataaccagtcagtagagtttgtttatattttatg 440

                                                                       
Query: 241 cacttttaaaatcaaacattggggatatacaggaaacaaatattgataggtgataaaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacttttaaaatcaaacattggggatatacaggaaacaaatattgataggtgataaaaat 500

                                                                       
Query: 301 atttaagatcaaatactcactatcaagttaggacttcatttaatgacagattcaggggtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttaagatcaaatactcactatcaagttaggacttcatttaatgacagattcaggggtg 560

                                                                       
Query: 361 gggttggtaagtggttaggactctactcttctagagaaccccatttcatatcctggtata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggttggtaagtggttaggactctactcttctagagaaccccatttcatatcctggtata 620

                                                                       
Query: 421 caagtcaagtgtaccacaaccacctggaactgtctccttagtaatctatgctctcttctg 480
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caagtcaagggtaccacaaccacctggaactgtctccttagtaatctatgctctcttctg 680

                                                                       
Query: 481 gcctttgctgtcacctgcacagatgtgaaatacattcacacagacacataaatgaaatga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcctttgctgtcacctgcacagatgtgaaatacattcacacagacacataaatgaaatga 740

                                                                       
Query: 541 aaaaaaattaaaaattataaactgtaagatttatttcaaagaataagaaaaatatgtgca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaaaaattaaaaattataaactgtaagatttatttcaaagaataagaaaaatatgtgca 800

                                                                       
Query: 601 ttgtgttttatttttgtgaatttcctggagaaactacatttgccatttgttttgagctta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttgtgttttatttttgtgaatttcctggagaaactacatttgccatttgttttgagctta 860

                   
Query: 661 atttgata 668
           ||||||||
Sbjct: 861 atttgata 868


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)