Query= MSMg01no522_e07.b1 MSMg01no522_e07.b1 CHROMAT_FILE:
MSMg01no522_e07.b1 PHD_FILE: MSMg01no522_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:50 2005
(617 letters)
>mm_chr8_95468657_95469677
Length = 1021
Score = 1129 bits (584), Expect = 0.0
Identities = 608/618 (98%), Gaps = 4/618 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagcagctgcaaggatatcaaagctaatggctgaagagttcccagggacaggtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ggaattcagcagctgcaaggatatcaaagctaatggctgaagagttcccagggacaggtt 762
Query: 64 tcctccctgcctcagccattgattttctcagctcttcttcacccagtttgctttgcttgt 123
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 761 tcctccctgcctcagccattgattttctcagttcttcttcacccagtttgctttgcttgt 702
Query: 124 atccctgtggaacataaacacaagccccagttcttccccctgctctatca----gggtgg 179
|||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 701 atccctgtggaacataaagacaagccccagttcttccccctgctctatcactgggggtgg 642
Query: 180 gtcacaaccatttgtgatcacttagaaggatacccaagggtcgctaagttcacttcacta 239
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 641 gtcataaccatttgtgatcacttagaaggatatccaagggtcgctaagttcacttcacta 582
Query: 240 actgtcaagtgtggcacttcacagttcagggtggatcaaggaaggacttacacctctgtc 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 actgtgaagtgtggcacttcacagttcagggtggatcaaggaaggacttacacctctgtc 522
Query: 300 acagggactcactagccagtaccttgcagaacacctggaggcccagtcatgctttattgg 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 acagggactcactagccagtaccttgcagaacacctggaggcccagtcatgctttattga 462
Query: 360 ctcacctagtgcttttcagcttgagagattctctatagaacacccgagtttctggttcat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ctcacctagtgcttttcagcttgagagattctctatagaacacccgagtttctggttcat 402
Query: 420 ataaagctgtgggagttccctttgactatcctggatttgagggagggcacgcattctcca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ataaagctgtgggagttccctttgactatcctggatttgagggagggcacgcattctcca 342
Query: 480 gatgatgtcatactccctatttccatagcacttgcttctttgttctatctttgagacatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gatgatgtcatactccctatttccatagcacttgcttctttgttctatctttgagacatt 282
Query: 540 tgaaactttgcaaccgctgttattgacacatctccctctttgtacaagcatgcacacccc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgaaactttgcaaccgctgttattgacacatctccctctttgtacaagcatgcacacccc 222
Query: 600 agaatgatggcgctgtct 617
||||||||||||||||||
Sbjct: 221 agaatgatggcgctgtct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1021
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1011
Effective search space: 613677
Effective search space used: 613677
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_e07.g1 MSMg01no522_e07.g1 CHROMAT_FILE:
MSMg01no522_e07.g1 PHD_FILE: MSMg01no522_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:50 2005
(593 letters)
>mm_chr8_95287292_95288284
Length = 993
Score = 1147 bits (593), Expect = 0.0
Identities = 593/593 (100%)
Strand = Plus / Plus
Query: 1 aggacctccagaagagcagtgggtgctcttagccactgagctatctctgcagcccccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggacctccagaagagcagtgggtgctcttagccactgagctatctctgcagcccccttg 260
Query: 61 gatatatttgatagctggagctctgtagcatttctttcaaagtggaacctcctcctggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatatatttgatagctggagctctgtagcatttctttcaaagtggaacctcctcctggtt 320
Query: 121 tagtttgtccctcctccgtgtcctccatgttccttctgctgcagggtgtgctgagctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtttgtccctcctccgtgtcctccatgttccttctgctgcagggtgtgctgagctttc 380
Query: 181 tgtccttcaaaagctaaatgagagtccatggcgggtggacatcttatgtgctgtcagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtccttcaaaagctaaatgagagtccatggcgggtggacatcttatgtgctgtcagttt 440
Query: 241 gtctatcatggactatgattgcttctgccttttggataatgagagtgatgttgcttacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctatcatggactatgattgcttctgccttttggataatgagagtgatgttgcttacaa 500
Query: 301 tgtgggtttataactattttctctgcttcccgctttctgttctgttggacctgctggtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgggtttataactattttctctgcttcccgctttctgttctgttggacctgctggtag 560
Query: 361 gttagagtgaagtttctgtatcttagagtaagtcatgttcaggttttggatggatcacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttagagtgaagtttctgtatcttagagtaagtcatgttcaggttttggatggatcacca 620
Query: 421 tacctctacttttattcagaggctgtatcatctaacatcctatcaggaacactcagggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacctctacttttattcagaggctgtatcatctaacatcctatcaggaacactcagggct 680
Query: 481 cttgttcattagcatccttgacaatgattgtcacttttttggttattgttgttgttacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttgttcattagcatccttgacaatgattgtcacttttttggttattgttgttgttacca 740
Query: 541 ttttagtattagttaactttgatactaagttttcaaatgaccttcaccaggtg 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttttagtattagttaactttgatactaagttttcaaatgaccttcaccaggtg 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
