NNNNNCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCCAAAGGTACATTATTTTGGCATATCACACTAGTGCTC
AAAGAACTTCCATGAAACAACTGTATGATATAGAATGTTGTTTCTCATAT
GAGTAAATGATGCTACTGTGTCAAGTTAATTTCCCTTGTCTACTTAAGAT
CAATTCAACTTTTTATTTTTGAGACTTAGAAGTTATAAGAAGCAATTGGC
TGACAGCTGCTCTGATTCAAATGTCTCCCTTTACTTCCACCAACCCACAT
AAAGGCAATAAAACAAAGATGGCGCCTTTGTTTTCAACATTAAGCGTGCA
GAACTAGCATGAGGTGAATCACCTGAGGTCTCCCTAGAGCACGCACACCC
TTCGCTAGTATCTCCCTTTTCTTCTCTAACTAGACCATTTATTTTTGAAA
ATAATGTATAGATCTGCAGACTTGAGTTTTTCAGTTTGATACTATTTTGT
GGATTATTAGAACCACTTTCTCTCCATTTACCAAAAGTATATAAGAATTA
CAAATGTAAAATTCTGGAACCATGCAGAGCCCGACAGCTGGTATTACACC
TTCCATTTCTTTATCCATTTACTCCTTTCTCTCTGGCTCTAAACATGCTA
GGAAATAAAAGAAAAATGTGTGGTCTCTTTTTGTCCAGNTTTGTTCCCTA
ATGTCATTCATTGCTCTGTGTATAGAAAATGNGNCTGNATTTTGTCTCTT
TAGACTGTGGACAGAGTCCCATGCCTGCT

NTTTTTTACGATGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACCTTTGAAAGTCAGGA
CACTACGATTTATCGCCATTAATGAAAGACTAAGGGGGCAAACCTCTGGA
CTGGCCACCGGGTCCAGGTTGTTAACCCAGGGGTTAATGACCTCAGGGTC
ATCACAGGAAGTAGACAGGATCTGGGTGGTCATAAGCCTCAGTACAGCCT
GGCAGAGCTGCCTAGCACTGCTCATGGCAAGAGGAAGCCAGGCCATCTTC
CATGCCTTTAAGCAGTGCTGGCAAGGGCCATGCCCCTGACCATAATCCAA
GCTTGTCTATAGTGTCCAAAAGACTCTTTCTGGGCAAATCTGTGGTGAAA
GGTACCAAGGACAGGAGGACATTTGTTCGGCCCAGTGGCTTGCCAAAGAA
TAGCCCCAAGGCAAATGCAGGCAAGGCCCAAGGGAAAAAGAGGACAATGG
AGTTGCTTAACAAGGCTAGAAAGCAAACAGAAAAAGCCTCAAATCTAATA
GACATCAGATAGCTCCCGAAGCAAGAGGTGTTTGTGAACAACACACACCC
ATGTAAGAAACACCCTAAACAGCAACCATGGAGCCTGGAGGAGTAGAGCC
GTGGCCATCTAGGGGGATACTAGACAAGGCTCATACAATCAGAAGAACCT
TTCAGTGCTGCGAAAGTCATTCCTTAGAAGAAACACCTTTTCTCAGGGCA
AGAAGATCAAGCCCTATTGTAG

Query= MSMg01no522_f20.b1 MSMg01no522_f20.b1 CHROMAT_FILE:
MSMg01no522_f20.b1 PHD_FILE: MSMg01no522_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:57 2005
         (601 letters)



>mm_chr8_28606211_28607211
          Length = 1001

 Score = 1118 bits (578), Expect = 0.0
 Identities = 593/598 (99%), Gaps = 2/598 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccaaaggtacattattttggcatatcacactagtgctcaaagaacttccatga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaattctccaaaggtacattattttggcatatcacactagtgctcaaagaacttccatga 742

                                                                       
Query: 65  aacaactgtatgatatagaatgttgtttctcatatgagtaaatgatgctactgtgt-caa 123
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 741 aacaactgtatgatatagaatgttgtttctcatatgagtaaatgatgctactgtgtccaa 682

                                                                       
Query: 124 gttaatttcccttgtctacttaagatcaattcaactttttatttttgagacttagaagtt 183
           |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 681 gttaatgtcccttgtctacttaagatcaattcaacttttta-ttttgagacttagaagtt 623

                                                                       
Query: 184 ataagaagcaattggctgacagctgctctgattcaaatgtctccctttacttccaccaac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ataagaagcaattggctgacagctgctctgattcaaatgtctccctttacttccaccaac 563

                                                                       
Query: 244 ccacataaaggcaataaaacaaagatggcgcctttgttttcaacattaagcgtgcagaac 303
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 562 ccacataaaggcaataaaacaaagatggcgcctttgttttcaacgttaagcgtgcagaac 503

                                                                       
Query: 304 tagcatgaggtgaatcacctgaggtctccctagagcacgcacacccttcgctagtatctc 363
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tagcgtgaggtgaatcacctgaggtctccctagagcacgcacacccttcgctagtatctc 443

                                                                       
Query: 364 ccttttcttctctaactagaccatttatttttgaaaataatgtatagatctgcagacttg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccttttcttctctaactagaccatttatttttgaaaataatgtatagatctgcagacttg 383

                                                                       
Query: 424 agtttttcagtttgatactattttgtggattattagaaccactttctctccatttaccaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agtttttcagtttgatactattttgtggattattagaaccactttctctccatttaccaa 323

                                                                       
Query: 484 aagtatataagaattacaaatgtaaaattctggaaccatgcagagcccgacagctggtat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aagtatataagaattacaaatgtaaaattctggaaccatgcagagcccgacagctggtat 263

                                                                     
Query: 544 tacaccttccatttctttatccatttactcctttctctctggctctaaacatgctagg 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tacaccttccatttctttatccatttactcctttctctctggctctaaacatgctagg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)