Query= MSMg01no522_l10.b1 MSMg01no522_l10.b1 CHROMAT_FILE:
MSMg01no522_l10.b1 PHD_FILE: MSMg01no522_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:23 2005
(581 letters)
>mm_chr8_48591075_48592055
Length = 981
Score = 1123 bits (581), Expect = 0.0
Identities = 581/581 (100%)
Strand = Plus / Minus
Query: 1 gtatatggtccacaaggccaagctgcatgcagccttccatagaggcgtataaacaatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtatatggtccacaaggccaagctgcatgcagccttccatagaggcgtataaacaatagc 722
Query: 61 aatagccacttgtgatgactgagctcaagtcaactgacctctccgctacacccgggaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatagccacttgtgatgactgagctcaagtcaactgacctctccgctacacccgggaggg 662
Query: 121 gcacaagagcagaatcccagaacagctctgtgtttttgcagaacctgaggtcacgagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcacaagagcagaatcccagaacagctctgtgtttttgcagaacctgaggtcacgagact 602
Query: 181 tgtttcttggggttctctcccccaagtgctcagaattccccttccacaattccattcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtttcttggggttctctcccccaagtgctcagaattccccttccacaattccattcttg 542
Query: 241 gactgtgttcctacacctagagctacattttattttttacttggtatctaaggaaaccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gactgtgttcctacacctagagctacattttattttttacttggtatctaaggaaaccca 482
Query: 301 tcattatagttaataaccctatgttgggtccttttataaatgggtttatctgaaagtagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcattatagttaataaccctatgttgggtccttttataaatgggtttatctgaaagtagt 422
Query: 361 attgagttactaaaacgtttcattactaccactgtaagtacttagagcggaaatgtctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgagttactaaaacgtttcattactaccactgtaagtacttagagcggaaatgtctgt 362
Query: 421 gggattagacactagttggtaagctagtcggtagtaactccttatttccttcagcgtccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggattagacactagttggtaagctagtcggtagtaactccttatttccttcagcgtccg 302
Query: 481 ccagtaagcatctgtcctgtcaagtgctgtaccagggccagcatcatacctatacatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagtaagcatctgtcctgtcaagtgctgtaccagggccagcatcatacctatacatgca 242
Query: 541 ggctcttggaagctgaggggatggtcagtgcctggccaggc 581
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggctcttggaagctgaggggatggtcagtgcctggccaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_l10.g1 MSMg01no522_l10.g1 CHROMAT_FILE:
MSMg01no522_l10.g1 PHD_FILE: MSMg01no522_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:23 2005
(577 letters)
>mm_chr8_48435858_48436837
Length = 980
Score = 1106 bits (572), Expect = 0.0
Identities = 577/580 (99%), Gaps = 3/580 (0%)
Strand = Plus / Plus
Query: 1 aaaatcgtggaggccactcctttacagaatcaaacacttaaaacaaatgtgtgccattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatcgtggaggccactcctttacagaatcaaacacttaaaacaaatgtgtgccattca 260
Query: 61 gcctacagttccacaggggtgggaatccattctgttattcccacctgccctccttggtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctacagttccacaggggtgggaatccattctgttattcccacctgccctccttggtca 320
Query: 121 cgtcctctacactagattacgttgtaaaatctaagatgccagaaggcatattgtggccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtcctctacactagattacgttgtaaaatctaagatgccagaaggcatattgtggccaa 380
Query: 181 gcacttcatgcttaaacactgagattcttgggttcagggggaaaatggacg---tcttcg 237
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 gcacttcatgcttaaacactgagattcttgggttcagggggaaaatggacgacgtcttcg 440
Query: 238 ttaacacagtgtacgcaggagccagtcaaactacagaaggtctcagacttaccgagcagg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaacacagtgtacgcaggagccagtcaaactacagaaggtctcagacttaccgagcagg 500
Query: 298 atacagtgtccatgtccacttggagacgatgctccctgtttctaaacaacctccagtgtg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atacagtgtccatgtccacttggagacgatgctccctgtttctaaacaacctccagtgtg 560
Query: 358 cgctgcactggaaagctcagtgacagttaactagctgacttctgcaacctgccattaatt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgctgcactggaaagctcagtgacagttaactagctgacttctgcaacctgccattaatt 620
Query: 418 gcccttttcaagttaaaatggctccattaattttatgtgcctgtctccccagcaaacgcc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcccttttcaagttaaaatggctccattaattttatgtgcctgtctccccagcaaacgcc 680
Query: 478 tttccaagaaagtttccatttctcaccgagatgtcaaataatttacctaagagtcccatt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttccaagaaagtttccatttctcaccgagatgtcaaataatttacctaagagtcccatt 740
Query: 538 cacacaggatttaactctaattttatataaacatcttaga 577
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cacacaggatttaactctaattttatataaacatcttaga 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 980
Length adjustment: 10
Effective length of query: 567
Effective length of database: 970
Effective search space: 549990
Effective search space used: 549990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
