Query= MSMg01no522_n20.b1 MSMg01no522_n20.b1 CHROMAT_FILE:
MSMg01no522_n20.b1 PHD_FILE: MSMg01no522_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:35 2005
(600 letters)
>mm_chr8_34080815_34081814
Length = 1000
Score = 1152 bits (596), Expect = 0.0
Identities = 596/596 (100%)
Strand = Plus / Minus
Query: 5 gaattcctgactgcagttgtcagttttggcaatttctttattcccttgtccttccttgaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gaattcctgactgcagttgtcagttttggcaatttctttattcccttgtccttccttgaa 741
Query: 65 gatgaaaaaacttggaaagaagttaaaattacagttttcactgtaaatgtttgctcgagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gatgaaaaaacttggaaagaagttaaaattacagttttcactgtaaatgtttgctcgagg 681
Query: 125 gcatagttgaagcagttaacagcatgggctttttgcattatgagtctttttttttttttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gcatagttgaagcagttaacagcatgggctttttgcattatgagtctttttttttttttt 621
Query: 185 caaaatgttgtttcaaaatgagacctttactaagacacaaatgaaacagtctccccatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caaaatgttgtttcaaaatgagacctttactaagacacaaatgaaacagtctccccatgc 561
Query: 245 atgatcagtgtcttgtgggtactgtgacagtaatatccatgtgagccttctctgaaaact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgatcagtgtcttgtgggtactgtgacagtaatatccatgtgagccttctctgaaaact 501
Query: 305 cccctcggacagcatgacttctcttgaccagggtggagtcaaccagacaaatggaagaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cccctcggacagcatgacttctcttgaccagggtggagtcaaccagacaaatggaagaaa 441
Query: 365 tgtaagtattattacttctacaattcaggattcttttctcctgtgggtagcagatggaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtaagtattattacttctacaattcaggattcttttctcctgtgggtagcagatggaaa 381
Query: 425 caaggtcagcttccttgaacataggaggatggatgacatactctggaaccttccatgtgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaggtcagcttccttgaacataggaggatggatgacatactctggaaccttccatgtgg 321
Query: 485 gtgagtgtggaatggtttgggtcacaggggccgacagtgatgtaactctgccaaacctgc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtgagtgtggaatggtttgggtcacaggggccgacagtgatgtaactctgccaaacctgc 261
Query: 545 ttggtggatcagcaagtgtagcgcagctcccaggagcctccactcttgtcatctgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttggtggatcagcaagtgtagcgcagctcccaggagcctccactcttgtcatctgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_n20.g1 MSMg01no522_n20.g1 CHROMAT_FILE:
MSMg01no522_n20.g1 PHD_FILE: MSMg01no522_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:35 2005
(538 letters)
>mm_chr8_34014174_34015111
Length = 938
Score = 758 bits (392), Expect = 0.0
Identities = 467/538 (86%), Gaps = 70/538 (13%)
Strand = Plus / Plus
Query: 1 ctaacttgcctgtagttctgggaggcctcatgggctcaaaccctctggtcctgagcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctaacttgcctgtagttctgggaggcctcatgggctcaaaccctctggtcctgagcattt 330
Query: 61 atctcagtagccttgcctttcctttcctttcctttcctttcctttcctttcctttccttt 120
|||||||||||||||
Sbjct: 331 atctcagtagccttg--------------------------------------------- 345
Query: 121 cctttcctttcctttcctttcctttcctttcctttcctttcctttcctttcctttccttt 180
|||||||||||||||||||||||||||||||||||
Sbjct: 346 -------------------------cctttcctttcctttcctttcctttcctttccttt 380
Query: 181 cctttcctttcctttcctttcctttcagcagttgattttatagttttcagtgcagtggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctttcctttcctttcctttcctttcagcagttgattttatagttttcagtgcagtggat 440
Query: 241 tccagccatttggttgaatttattcatcaacactttttagttttgtgtatattttatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccagccatttggttgaatttattcatcaacactttttagttttgtgtatattttatgaa 500
Query: 301 tggagtttaaaattactaccatacttttctcctttagtagaaaaaaaaacacttcagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggagtttaaaattactaccatacttttctcctttagtagaaaaaaaaacacttcagatt 560
Query: 361 ttaaaaacattgaccttgatttctgtgcctttgctacattcagcagcccccaacattgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaaaacattgaccttgatttctgtgcctttgctacattcagcagcccccaacattgac 620
Query: 421 ttagaaatccatgtgtattttctgaaaagtcttttaggaacaggtgtcttcttttcactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttagaaatccatgtgtattttctgaaaagtcttttaggaacaggtgtcttcttttcactg 680
Query: 481 taatctccatgggttgtggttttcctcactgcaagtagggcaaagaataaccacttag 538
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taatctccatggtttgtggttttcctcactgcaagtagggcaaagaataaccacttag 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
