Query= MSMg01no523_i07.b1 MSMg01no523_i07.b1 CHROMAT_FILE:
MSMg01no523_i07.b1 PHD_FILE: MSMg01no523_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:27 2005
(669 letters)
>mm_chr8_121471166_121472234
Length = 1069
Score = 1226 bits (634), Expect = 0.0
Identities = 661/670 (98%), Gaps = 1/670 (0%)
Strand = Plus / Plus
Query: 1 aaactgtcttcgtgaaagcaatcgccttgagcagagtggaggctgtgatgggtgagccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaactgtcttcgtgaaagcaatcgccttgagcagagtggaggctgtgatgggtgagccca 259
Query: 61 gggccaagggataattgggagggttgccttcagctgctgaggaccatgtgggtgggtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gggccaagggataattgggagggttgccttcagctgctgaggaccatgtgggtgggtttg 319
Query: 121 gagctatggatgcccgcggcatgcctcccagagcggtacttgccccaccctccacagaaa 180
|||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 320 gagctatggatgcccgaggcatgtctcccagagcagtacttgccccaccctccacagaaa 379
Query: 181 acagaatgggtaaatcagttagcaccaagcaagggggcagcctcagcacgtatgggaggg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 acagaatgggtaaatcagttagcaccgagcaagggggcagcctcagcacgtatgggaggg 439
Query: 241 acagtgctcttcagacacaccagcagagggcatccgatctcattacagatggttgagagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acagtgctcttcagacacaccagcagagggcatccgatctcattacagatggttgagagc 499
Query: 301 caccatgtggttgctgggatttgaactcagcacctccggaagagctcttaaccgctgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caccatgtggttgctgggatttgaactcagcacctccggaagagctcttaaccgctgagc 559
Query: 361 catctctccagcccctcttcttaatttttaagagactgaattaaaaaa-tcctgaattgt 419
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 560 catctctccagcccctcttcttaatttttaagagactgaattaaaaaaatcctgaattgt 619
Query: 420 catgtgcttaccacacaatgctcgttcgttcattcattcatccattcattgatgaactga 479
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 620 catgtgcttaccacacaatgctcgttcgttcattcattcattcattcattgatgaactga 679
Query: 480 tttcacttgtttatataatcaacaaacgctgggcagcttatacatgctagatattgagga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttcacttgtttatataatcaacaaacgctgggcagcttatacatgctagatattgagga 739
Query: 540 gacatggaaaaaacgcaaaaccctcctggggtggagcaggtggcaaggccacttgccagc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gacatggaaaaaacgcaaaaccctcctggggtggagcaggtggcaaggccacttgccagc 799
Query: 600 aagagcccaggtactgctatagagaacagggaacgggtgaaggattaacccttggagtgg 659
|||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct: 800 aagagcccaggtactgctatagagaacagggagcgggtgaaggattagctcttggagtgg 859
Query: 660 ctagcatcct 669
||||||||||
Sbjct: 860 ctagcatcct 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_i07.g1 MSMg01no523_i07.g1 CHROMAT_FILE:
MSMg01no523_i07.g1 PHD_FILE: MSMg01no523_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:27 2005
(668 letters)
>mm_chr8_121641503_121642570
Length = 1068
Score = 1230 bits (636), Expect = 0.0
Identities = 660/668 (98%)
Strand = Plus / Minus
Query: 1 cagacaggaagccacacctactgctccatttctctgctaatgtttccttcttcctgggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 cagacaggaagccacacctactgctccatttctctgctaatgtttccttcttcctgggct 809
Query: 61 cctgttagccatcaagttacctccaatttcctgatagcattttgagaaattaaaacttta 120
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 808 cctgttagccatcaagttgcctccaatttcctgatagcattttgagaaatgaaaacttta 749
Query: 121 ggagaagcaaattttttcgccccgtcatgttgtgtatatttaatattccattagatttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ggagaagcaaattttttcgccccgtcatgttgtgtatatttaatattccattagatttgg 689
Query: 181 ctcacttatctctataatttcaaaccgtactgtatcatttatgggccacagaaggatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctcacttatctctataatttcaaaccgtactgtatcatttatgggccacagaaggatttt 629
Query: 241 cataggcaggtggagtccaacggtggaacagggtgtttatcagtttcttcaaaatgtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cataggcaggtggagtccaacggtggaacagggtgtttatcagtttcttcaaaatgtcat 569
Query: 301 ctaaattcatttttcacattgtaagattggcaccgtgtactttctccatctcagagagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctaaattcatttttcacattgtaagattggcaccgtgtactttctccatctcagagagca 509
Query: 361 aacagtcgcacacagccaactatcccctctaatatgaataaaaacgcctctctactttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aacagtcgcacacagccaactatcccctctaatatgaataaaaacgcctctctactttat 449
Query: 421 ctgttctaaaccaatatccctgaagaatgtaaatatctcactctttttcttttgtttctt 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctgctctaaaccaatatccctgaagaatgtaaatatctcactctttttcttttgtttctt 389
Query: 481 acagagcaggcccaggggaagctcatcagatacatctctgccatctctccatacagctcc 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 388 acagagcaggcccaggggaagctcatcagatacatctcagccatctctccatacagctcc 329
Query: 541 taggctgagccaagaaatcaaaccccacctgtggtgcgaagccagcacgcgctctaagca 600
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 328 taggctgagccaagaaatcaaaccccacctgtggtgcgaagccagcacacgctctaagca 269
Query: 601 gttcattatggtaaagctcacgccagacctcggggagatgctctgccagccagactcctg 660
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 268 gttcattatggtaaagctcacgccagacctcggggagatgctctgctagccaggctcctg 209
Query: 661 tatgcacc 668
| ||||||
Sbjct: 208 tgtgcacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
