Query= MSMg01no523_j13.b1 MSMg01no523_j13.b1 CHROMAT_FILE:
MSMg01no523_j13.b1 PHD_FILE: MSMg01no523_j13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:34 2005
(647 letters)
>mm_chr8_103912914_103913954
Length = 1041
Score = 1164 bits (602), Expect = 0.0
Identities = 631/644 (97%), Gaps = 6/644 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttcatcccccagcagcacatacacagtacattcatgttttcacaaaacttaca 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggaattcttcagcccccagcagcacatacacagtacattcatgttttcacaaaacttaca 782
Query: 64 caaacacacagcacatactaaatcccaaagcatgctttaatatccttaacttagaaaaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 caaacacacagcacatactaaatcccaaagcatgctttaatatccttaacttagaaaaaa 722
Query: 124 tatattttatttgctcaaggcaacgtagtaaacactaaaagcacaatttatctaaaatat 183
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tatattttatttgctcaagacaacgtagtaaacactaaaagcacaatttatctaaaatat 662
Query: 184 tcataaatatatgaaaattggaccaaacaacataacataatacgggtcaaagaaagtctt 243
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 661 tcataagtatatgaaaattggaccaaacaacataacaaaatacgggtcaaagaaagtctt 602
Query: 244 agaagtattaatatatgagtgttaatcaacattaaatacacatggcctgaaaaatctaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaagtattaatatatgagtgttaatcaacattaaatacacatggcctgaaaaatctaga 542
Query: 304 actaaacatagatccatattgcataaaattgtatgtatcataagtaaatatagcaattta 363
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 541 actaaacatagacccatattgcataaaattgtatgtatcttaagtaaatatagcaattta 482
Query: 364 gtaaaaggttaaagaaatgcatctgaagactaatgttgacatattaggaatttgggaaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtaaaaggttaaagaaatgcatctgaagactaatgttgacatattaggaatttgggaaaa 422
Query: 424 taaaattaaaacaaaaagcacgcaaatttacaacacaaatccaatgaactacaggaacaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaaattaaaacaaaaagcacgcaaatttacaacacaaatccaatgaactacaggaacaa 362
Query: 484 aggtgaggaaacaagaatatggtccttcgctttcacatttgaagtgatttggatcaagct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggtgaggaaacaagaatatggtccttcgctttcacatttgaagtgatttggatcaagct 302
Query: 544 agggtagcatctaccagtatgtttcctatttattctaattactcgttatttcttctttaa 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agggtagcatctaccagtatgtttcctatttattctaattactcgttatttcttcttta- 243
Query: 604 tttaatttttcatcctctgcatgtagaagtaattttcatgtaat 647
||||||||||||||||| |||||||||||||||||||||
Sbjct: 242 -----tttttcatcctctgcatttagaagtaattttcatgtaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1041
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1031
Effective search space: 656747
Effective search space used: 656747
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_j13.g1 MSMg01no523_j13.g1 CHROMAT_FILE:
MSMg01no523_j13.g1 PHD_FILE: MSMg01no523_j13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:34 2005
(633 letters)
>mm_chr8_103782401_103783432
Length = 1032
Score = 1172 bits (606), Expect = 0.0
Identities = 624/630 (99%), Gaps = 1/630 (0%)
Strand = Plus / Plus
Query: 1 agacatgcaaaatggaaaggcagagcactagaagaatcatgggtggagagaaaaataata 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 agacatgcaaaatggaaaggcagagcactagaagaatcatgggtggagagaaaaataaaa 260
Query: 61 ggagtagttgtgatacagctgtagccagctgttattgcaaacagatgtaaaggatgctgt 120
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 261 ggagtagttgtgatacagctgtagccagctgttgttgcaaacagatgtaaaggatgctct 320
Query: 121 tatccgcagggccatcattctcatccctttctcttcactcaaacactcatgtgctcctgt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatccgcagggccagcattctcatccctttctcttcactcaaacactcatgtgctcctgt 380
Query: 181 ccccagggttcatacagttcttaaattcacacaattcttatttttgctctcaggttatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccccagggttcatacagttcttaaattcacacaattcttatttttgctctcaggttatta 440
Query: 241 gaatattcatccttcatagttaaagtcaaatgccaacactgctgggatgcctgtctcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatattcatccttcatagttaaagtcaaatgccaacactgctgggatgcctgtctcaat 500
Query: 301 ctctcaagcccaaattaatcatctttcattgacattctcttagaacagaatttatgaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctcaagcccaaattaatcatctttcattgacattctcttagaacagaatttatgaatt 560
Query: 361 tattaaagattaattttactctactgtaatcatttagtaataaatcattcatccttctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattaaagattaattttactctactgtaatcatttagtaataaatcattcatccttctac 620
Query: 421 tataagtttctattaagataggtaccagatctggtatatatgtgtatgaattgaaagtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tataagtttctattaagataggtaccagatctggtatatatgtgtatgaattgaaagtgt 680
Query: 481 tgttgtttgattaagaaaatagatacaataaaaataaaaccaaataactttcagatctta 540
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 681 tgttgtttgattaagaaaatagatacaattaaaa-aaaaccaaataactttcagatctta 739
Query: 541 agtagtcagtactctgccagatctttaaaaaaaatcctctgcaaatactataagaaacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agtagtcagtactctgccagatctttaaaaaaaatcctctgcaaatactataagaaacat 799
Query: 601 cttatttccagattaaaaaataagaaagca 630
||||||||||||||||||||||||||||||
Sbjct: 800 cttatttccagattaaaaaataagaaagca 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
