Query= MSMg01no523_k01.b1 MSMg01no523_k01.b1 CHROMAT_FILE:
MSMg01no523_k01.b1 PHD_FILE: MSMg01no523_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:36 2005
(592 letters)
>mm_chr8_89065613_89066609
Length = 997
Score = 1096 bits (567), Expect = 0.0
Identities = 585/593 (98%), Gaps = 5/593 (0%)
Strand = Plus / Plus
Query: 1 cagaactccttttttttt--cctcacagagggggaaatccacttccatgtggaactttgg 58
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaactcctttttttttttcctcacagagggggaaatccacttccatgtggaactttgg 260
Query: 59 gactttgatggtgtttagtaacccatttagaaagcacatcaggcccagtttgtgatgctg 118
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gactttgatggtgtttagtaacccatttagaaagcacatcaggtccagtttgtgatgctg 320
Query: 119 aggatccacaggtacttcaacggacccagcaaagtgtgcttctgatagacagtggtaaac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggatccacaggtacttcaacggacccagcaaagtgtgcttctgatagacagtggtaaac 380
Query: 179 agtatcggtgatatcaggatctaatactgtcaggagagggcatctgtaggatccctctga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtatcggtgatatcaggatctaatactgtcaggagagggcatctgtaggatccctctga 440
Query: 239 tgatcatggggtggtggcagtgtggctgagcaggcaacatgccacatgatgtgatgctat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatcatggggtggtggcagtgtggctgagcaggcaacatgccacatgatgtgatgctat 500
Query: 299 tttgacaatggggatggttttaggggcctcgacttggacaagagaca---ttagcaagtg 355
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 501 tttgacaatggggatggttttaggggcctcgacttggacaagagacaacattagcaagcg 560
Query: 356 cagttctaggaatagcgggtgccttctggggatggtgctgagccagttgacactgtgatt 415
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagttctaagaatagcgggtgccttctggggatggtgctgagccagttgacactgtgatt 620
Query: 416 ggtccttaggactcagctctgactagcgtgtatgctcccttttctaactctccttggcca 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtccttaggactcagctctgactagcgtgtatgctcccttttctaactctccttggcca 680
Query: 476 ttttgtaaaggaataaagcaagatccatgggggctcagtttctttgtccaagggaaaatg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttgtaaaggaataaagcaagatccatgggggctcagtttctttgtccaagggaaaatg 740
Query: 536 gtgaacatgtgattgagacaaagtggtgaatcctcccaatctaggacccactg 588
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgaacatgtgattgagacaaagtggtgaatcctcccaatctaggacccactg 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 997
Length adjustment: 10
Effective length of query: 582
Effective length of database: 987
Effective search space: 574434
Effective search space used: 574434
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_k01.g1 MSMg01no523_k01.g1 CHROMAT_FILE:
MSMg01no523_k01.g1 PHD_FILE: MSMg01no523_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:36 2005
(569 letters)
>mm_chr8_89264752_89265720
Length = 969
Score = 717 bits (371), Expect = 0.0
Identities = 374/375 (99%)
Strand = Plus / Minus
Query: 195 cctctcaaaggttacagtttttagtatttggtgttttgcctgcatgcaccatatgcatgc 254
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 969 cctctcaaaggttacagtttttagtatttggtgttttgcctgcatgcaccagatgcatgc 910
Query: 255 ctagtgcctgaggagaccataagagggcattgcatcctttggacctggagttatagacag 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 ctagtgcctgaggagaccataagagggcattgcatcctttggacctggagttatagacag 850
Query: 315 atgtgagctgctgtgtaggtgctgggaacttaacccagctcaggaagaacagccagggtg 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 atgtgagctgctgtgtaggtgctgggaacttaacccagctcaggaagaacagccagggtg 790
Query: 375 ctcttaaccctgggccagctacaagtttttaaaggacaactcccttcttgcttttctgct 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ctcttaaccctgggccagctacaagtttttaaaggacaactcccttcttgcttttctgct 730
Query: 435 agcctgctgactatttttatgcttttctctatctgttggtttcctgctgtggatggacct 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 agcctgctgactatttttatgcttttctctatctgttggtttcctgctgtggatggacct 670
Query: 495 ccccactgctacccttactcttccctggtctatgtatgtgcctcagcttgagacaggtag 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ccccactgctacccttactcttccctggtctatgtatgtgcctcagcttgagacaggtag 610
Query: 555 cttataattggatca 569
|||||||||||||||
Sbjct: 609 cttataattggatca 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
