Query= MSMg01no524_l12.b1 MSMg01no524_l12.b1 CHROMAT_FILE:
MSMg01no524_l12.b1 PHD_FILE: MSMg01no524_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:04 2005
(628 letters)
>mm_chr8_80751734_80752764
Length = 1031
Score = 1131 bits (585), Expect = 0.0
Identities = 617/629 (98%), Gaps = 5/629 (0%)
Strand = Plus / Plus
Query: 4 ggaattctccacctgtaggttaaaaagtaca---ttattctctctctctctctttttttg 60
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 204 ggaattctccacctgtaggttaaaaaatacaacattattctctctctctctctttttttg 263
Query: 61 aagcaagaatattttatgtctaaccatgagaaatgataaagaaaagaaaatttagggcaa 120
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 264 aagcaagaatattttatgtctaaccatgagaaatgataaagaaaataaaatttaaggcaa 323
Query: 121 cattgttctgcagtttttaattacattatttagaaacactccaatttcttatgatcttga 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cattgttcttcagtttttaattacattatttagaaacactccaatttcttatgatcttga 383
Query: 181 ggttaattaccaagatacacactcaggtatttacatgtttgtaaatgtgtgtatatggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggttaattaccaagatacacactcaggtatttacatgtttgtaaatgtgtgtatatggta 443
Query: 241 tgttgatatgtgtgtaaatatgtatcctcagacttgtgctttaaccaataatattaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgttgatatgtgtgtaaatatgtatcctcagacttgtgctttaaccaataatattaattt 503
Query: 301 tctatatacct-ctaggcaaaagtcatacattttgaccatcttcttcagattaacaagta 359
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctatatac-tactaggcaaaagtcatacattttgaccatcttcttcagattaacaagta 562
Query: 360 tcttaaacacactcagaaaactcaaaagaagctaatcacatccttttcttcatcatgatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tcttaaacacactcagaaaactcaaaagaagctaatcacatccttttcttcatcatgatc 622
Query: 420 cacaaactcaggcaaaactcaacagtccactaactcaggtgtcagcgttaggctaagcaa 479
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cacaaactcgggcaaaactcaacagtccactaactcaggtgtcagcgttaggctaagcaa 682
Query: 480 catctacatataggttacatgcctttaaaatgctcaagaaacaccatgtgcatgttactg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 catctacatataggttacatgcctttaaaatgctcaagaaacaccatgtgcatgttactg 742
Query: 540 acaggaagatggaagaacgcaaatccattgcagaaccaaacagccaagttagaaattata 599
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 743 acaggaagatggaagaacgcaaatacattgcagagccaaacagccaagttagaaattata 802
Query: 600 tgaaactagaaaggtttaaattgaataag 628
|||||||||||||||||||||||||||||
Sbjct: 803 tgaaactagaaaggtttaaattgaataag 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1031
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1021
Effective search space: 630978
Effective search space used: 630978
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_l12.g1 MSMg01no524_l12.g1 CHROMAT_FILE:
MSMg01no524_l12.g1 PHD_FILE: MSMg01no524_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:04 2005
(556 letters)
>mm_chr8_80910924_80911879
Length = 956
Score = 669 bits (346), Expect = 0.0
Identities = 349/350 (99%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 1 acgatgctgtgaggtcaacatgattttgcaacacagtttccctggagaacagacttgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 acgatgctgtgaggtcaacatgattttgcaacacagtttccctggagaacagacttgcct 290
Query: 61 tgtattttgagaaatagatgtagaaacttaaaatttgccactcatatttggtaaccagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgtattttgagaaatagatgtagaaacttaaaatttgccactcatatttggtaaccagaa 230
Query: 121 aataactttgaataaatatatagatttctgctgggtgtggtggcgtatgcctttaatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aataactttgaataaatatatagatttctgctgggtgtggtggcgtatgcctttaatccc 170
Query: 181 agcacttgggaggcagaggcaggcagatttttgagttcaaggccaccctggtctacagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 agcacttgggaggcagaggcaggcagatttttgagttcaaggccaccctggtctacagag 110
Query: 241 tgagttccaggacagccagggatacacagagaaaccctgtctcaaaaatatatattatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tgagttccaggacagccagggatacacagagaaaccctgtctcaaaaatatatattatct 50
Query: 301 gtatatttctatatatctattttatttcttcttcttcttcttcttcttct 350
||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 gtata-ttctatatatctattttatttcttcttcttcttcttcttcttct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
