Query= MSMg01no524_o23.b1 MSMg01no524_o23.b1 CHROMAT_FILE:
MSMg01no524_o23.b1 PHD_FILE: MSMg01no524_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:22 2005
(568 letters)
>mm_chr8_118268659_118269628
Length = 970
Score = 971 bits (502), Expect = 0.0
Identities = 534/556 (96%), Gaps = 20/556 (3%)
Strand = Plus / Minus
Query: 15 cagtgtcagacacaaagcaatgacccagcttatgtttgtgggatggatggacctgccact 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 cagtgtcagacacaaagcaatgacccagcttatgtttgtgggatggatggacctgccact 911
Query: 75 acaggatgcttgtttttcagaatctgctcgctgtcaattggttacatctatgctctctgt 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 acaggatgcttgtttttcagaatctgctcgctgtcaattggttacatctatgctctctgt 851
Query: 135 ctctcttttctctctgtctctctctgtcctgtctttctctttcctgtctctctctctctt 194
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 ctctcttttctctctgtctctctctgtcctgtctttctctttcctg-------------- 805
Query: 195 tctctctctctctctctctctctctctctctctctctcattggcaagcaataagggaggg 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ----tctctctctctctctctctctctctctctctctcattggcaagcaataagggaggg 749
Query: 255 aatattatgacccaatttaccagaaattctttgatttgtttccatctttctctgagcagc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aatattatgacccaatttaccagaaattctttgatttgtttccatctttctctgagcagc 689
Query: 315 aagaccttcaagctctctgccgccatgttaatatctccagtgatgctatctggtgcttct 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aagaccttcaagctctctgccgccatgttaatatctccagtgatgctatctggtgcttct 629
Query: 375 gtctcctgccagagacaacgcctgctcccagagagttccaggccttgtcccaccctcttt 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gtctcctgccagagacaacgcctgctcccagagagttccaggccttgtcccaccctcttt 569
Query: 435 atgtctgttaaggcaggttgggaaaggcaaaaacttatcctcttaaagcttgaaggtttt 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atgtctgttaaggcaggttgggaaaggcaaaaacttatcctcttaaagcttgaaggtttt 509
Query: 495 ttttttt-ccccaaccagtacagcttgagaaaaaaaac-atgagtcttttgccaaacttg 552
||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 508 ttttttttccccaaccagtacaccttgagaaaaaaaaatatgagtcttttgccaaacttg 449
Query: 553 aaagtcgctgttagga 568
||||||||||||||||
Sbjct: 448 aaagtcgctgttagga 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 970
Length adjustment: 10
Effective length of query: 558
Effective length of database: 960
Effective search space: 535680
Effective search space used: 535680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_o23.g1 MSMg01no524_o23.g1 CHROMAT_FILE:
MSMg01no524_o23.g1 PHD_FILE: MSMg01no524_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:22 2005
(613 letters)
>mm_chr8_118151965_118152977
Length = 1013
Score = 1110 bits (574), Expect = 0.0
Identities = 598/606 (98%)
Strand = Plus / Plus
Query: 1 cagagccgctttcccaacctccctgaacaggaccctcttccttctgagtcctccagaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagccgctttcccaacctccctgaacaggaccctcttccttctgagtcctccagaaag 260
Query: 61 aaagataataaagccatctcctcctcgttccaggcaatctttccccatcagccacacact 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 aaagataataaagccatctcctcctcgtttcaggcaatctttccccatcagccacacact 320
Query: 121 ctgtgcataagttggcaatttttccaatgcaagaacccaagaagaaggagctggggagat 180
|||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 321 ctgtgcataagttggcaatttttccagtgcaagaacccaagatgaaggatctggggagat 380
Query: 181 ggcttagttgctcaaatgattgccagcaagctcgaggacctgagttcaaatcctagcatc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ggcttagttgctcaaatgattgccagcaagcttgaggacctgagttcaaatcctagcatc 440
Query: 241 cccacataaagctcaatatgtgtggtgcttgtaattccagtgctgagatagcagagagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccacataaagctcaatatgtgtggtgcttgtaattccagtgctgagatagcagagagag 500
Query: 301 aaggatatctggggcttgctggccagccatcaattagtggattttagggtactgagagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggatatctggggcttgctggccagccatcaattagtggattttagggtactgagagac 560
Query: 361 cctgtcttaaaaaataaggtaatagctatggagtagtactagaagttattttctatcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgtcttaaaaaataaggtaatagctatggagtagtactagaagttattttctatcacc 620
Query: 421 cacaagcatgcacttcatattctctttagcaactaagccatcttcccaactctttcattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacaagcatgcacttcatattctctttagcaactaagccatcttcccaactctttcattg 680
Query: 481 caggttcttgtactataaagattgccaactcatacacagacacatgcatacacatatata 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 caggttcttgtactataaagattgccaactcatacacagacacatgcatacacatacata 740
Query: 541 aacatacaaatgcacctttctcccacacaaatgtgtatacagctacacacacacacacac 600
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aacatacaaatgtacctttcccccacacaaatgtgtatacagctacacacacacacacac 800
Query: 601 acacac 606
||||||
Sbjct: 801 acacac 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
