Query= MSMg01no525_e14.b1 MSMg01no525_e14.b1 CHROMAT_FILE:
MSMg01no525_e14.b1 PHD_FILE: MSMg01no525_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:51 2005
(571 letters)
>mm_chr8_7400931_7401901
Length = 971
Score = 1089 bits (563), Expect = 0.0
Identities = 566/567 (99%)
Strand = Plus / Plus
Query: 5 ggaattcacctcatcttaaacatggaggagcatggcttggaagacagaaatgaggagaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcacctcatcttaaacatggaggagcatggcttggaagacagaaatgaggagaaa 264
Query: 65 ggacaaagtttggattgtgaagaacagaaaaccatggtccttcctcctaaattaagttcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggacaaagtttggattgtgaagaacagaaaaccatggtccttcctcctaaattaagttcc 324
Query: 125 atgccaagcgagccaggttgcctttcatcactaaattcctatgtcatattttcttactgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgccaagcgagccaggttgcctttcatcactaaattcctatgtcatattttcttactgg 384
Query: 185 atattttatttacatttcaaatgttatcccctttccaggtttccgcacaccccccacacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atattttatttacatttcaaatgttatcccctttccaggtttccgcacaccccccacacc 444
Query: 245 ccagaaaccttgtatcccatacccctgtccctagttctatgaaggtattcccttacctac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccagaaaccttgtatcccatacccctgtccctagttctatgaaggtattcccttacctac 504
Query: 305 ccacccaccctctcctgccttcctgacctggcatttccctacacaggggcatcaagcctt 364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 ccacccaccctctcctgccttcctgacctggcatttccctacacagtggcatcaagcctt 564
Query: 365 cccagaaccaaggtcctctcctcccatagatgtccaacaaggccatcctctgctacatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccagaaccaaggtcctctcctcccatagatgtccaacaaggccatcctctgctacatat 624
Query: 425 gtggctggaaccatgggtctctccatgtgtactcttttgagagctctgagggatctggtt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtggctggaaccatgggtctctccatgtgtactcttttgagagctctgagggatctggtt 684
Query: 485 ggttgatattgttgttcttcccatggggttgcaaaccccttcagctccctatatcttaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggttgatattgttgttcttcccatggggttgcaaaccccttcagctccctatatcttaca 744
Query: 545 tggatggatatagtcatgaaatcggtg 571
|||||||||||||||||||||||||||
Sbjct: 745 tggatggatatagtcatgaaatcggtg 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_e14.g1 MSMg01no525_e14.g1 CHROMAT_FILE:
MSMg01no525_e14.g1 PHD_FILE: MSMg01no525_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:51 2005
(368 letters)
>mm_chr8_7592834_7593601
Length = 768
Score = 681 bits (352), Expect = 0.0
Identities = 364/368 (98%)
Strand = Plus / Minus
Query: 1 ttttacaaagaatctacacatgcgaaggtaacagaggaaaaattaacaaaatcatccaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 568 ttttacaaagaatctacacatgcgaaggtaacagaggaaaaattaacaaagtcatccaaa 509
Query: 61 tgataaaaaatagctaggatgtgattttaacagtctctttctacaatcattgaagagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgataaaaaatagctaggatgtgattttaacagtctctttctacaatcattgaagagtca 449
Query: 121 cagatgatgactttcatattgatgggaactgaacctggacaaaggcaaaattatgttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cagatgatgactttcatattgatgggaactgaacctggacaaaggcaaaattatgttggt 389
Query: 181 gggctagatatagaggaagatgctgagagtagaaaaaaaacaaatatgtgtgtgctcatg 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 388 gggctagatatagaggaagatgctgagagtagataaaaaacaaatatgtgtgtgctcatg 329
Query: 241 tgctttaggatcagaaagggagaagacatctaggatatcgcacatagaatgttaaacaat 300
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 328 tgctttaggatcagaaagagagaagacatctaggatatcacacatagaatgttaaacaat 269
Query: 301 gggtgaatgtgggtgccgttcagcaatacagattctttggtataatgatgtccatgataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gggtgaatgtgggtgccgttcagcaatacagattctttggtataatgatgtccatgataa 209
Query: 361 atgtgtag 368
||||||||
Sbjct: 208 atgtgtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
