XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
AGAAACTCCAATAAAGGCTCTCTCCTTCCTTGTTTGTTTTGTTTTGTTTT
TGTTTTTGTTTTTATTCAGTCTGGGATGCCAGCCCATAAGCTGGTGCTGC
CCGTATATAAGATGGGCCTTTCTCCTTAGTGAGAGCTCTCTGGAAACCCT
CTCACAGTCACATCCAGAGGTTTGTCTTCTAGGTGACTCCAAATCTAGTC
AAGTTGCCAGTGAAGAGCAACCATCACAGAGCTCTGGGGGCAGGCTTTGC
CACTGGACAGATGAGGACTAGAGTTGAGGGGGGGGGCGAGGGGCTAGGAG
AGGACTTTCCAATGGGAATGGGAATCAGATAGACTAGGTGAAAGGTGTTG
CATTTGGGCTGAGCATTAAAGGGTTGGGAGGCCTTGGCTGGCACAGTGAG
GAAGGAAAATCATCCCAGAAGCAAAGGACAGCTTGGGCAAAGGCTCAGAG
GCAGGAAGCATGTATGGCTATCCTGGGCTGATCTACTGTGTTTAGCAAGG
CCAGGCAGACATATCCAGGAAGGAGCTTAGTTGGAGCTAGGCACAAGTAC
ATGAAGCAATACTTGGTGCTGTAATAGATTAGATCTAACCCACACTCTCA
AGGCCATCCTATCTGAGAGAAGTTATAAAGCCTAGGACACAGAGTCACAC
AGTATGACTTGTACTAGGAG

TTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGCTATTTACCCCATTTTTA
AATTGATTTATGAGTTTCTAACTTCTTGTGTTCTTTATATATTTTGGACT
TTAGTTCTCTCTCAAGTGTAGGGTTGGTGGGTATCTTTTCCTAATATGTA
GGCTTCCATTTTTTCCTATTGACAATGTCCTTTGTCTTGCAGAAGTTTTT
CAGTTTCATGAGTCCCTATGTTTCAAGTATTGATCTTAGAGCCTGAGACA
TTGGTGTTCTGTTCAGAAAATTGTCTACTGAACCAATGTATCAAGGATAT
TTCCCACCTTGTCTCCTAGCAAATTTAGTGTATCTGGTTTAGTGGTCTAG
AGGTCTTTGGTGCCTGTGAACTCAAGTTTTGTGCTGGGGGATAAATATAG
GTCTATATGCATTCATCCTCTTGTAGACGTCCAGTTAGACCTGCAACATT
TGTTGAAGATATTTTCTTTCTTTTTTTCCATTGTATGACTTTTATGTCAA
AATCAAGTGTTGGTGGGTGTGTGACTTATTTCTGGGTCTTCGATTTGATT
CCACAGACCAACTTGTTCATTTCCATAGGTATACCATGCAGTTTTTATTT
CTGATTGCTCTGTGGNACGTCTTGAGACTAGGTATGATGATACATCCAGG
AATTATTTTATTATATATA

Query= MSMg01no525_p09.b1 MSMg01no525_p09.b1 CHROMAT_FILE:
MSMg01no525_p09.b1 PHD_FILE: MSMg01no525_p09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:45 2005
         (677 letters)



>mm_chr8_19988190_19989266
          Length = 1077

 Score = 1241 bits (642), Expect = 0.0
 Identities = 665/676 (98%), Gaps = 7/676 (1%)
 Strand = Plus / Plus

                                                                       
Query: 9   tccagaaactccaataaaggctctctccttccttgtttgttttgttttgtttt-----tg 63
           |||||||||||||||||||||||||||||||||||||||||||||||||||||     ||
Sbjct: 202 tccagaaactccaataaaggctctctccttccttgtttgttttgttttgttttgtttttg 261

                                                                       
Query: 64  tttttgtttttattcagtctgggatgccagcccataagctggtgctgcccgtatataaga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tttttgtttttattcagtctgggatgccagcccataagctggtgctgcccgtatataaga 321

                                                                       
Query: 124 tgggcctttctccttagtgagagctctctggaaaccctctcacagtcacatccagaggtt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgggcctttctccttagtgagagctctctggaaaccctctcacagtcacatccagaggtt 381

                                                                       
Query: 184 tgtcttctaggtgactccaaatctagtcaagttgccagtgaagagcaaccatcacagagc 243
            |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 382 agtcttctaggtgactccaaatctagtcaagttgccagtgaagaggaaccatcacagagc 441

                                                                       
Query: 244 tctgggggcaggctttgccactggacagatgaggactagagttgaggggggggg--cgag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 442 tctgggggcaggctttgccactggacagatgaggactagagttgagggggggggggcgag 501

                                                                       
Query: 302 gggctaggagaggactttccaatgggaatgggaatcagatagactaggtgaaaggtgttg 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gggctaggagaggactttccaatgggaatgggaatcagatagactaggtgaaaggtgttg 561

                                                                       
Query: 362 catttgggctgagcattaaagggttgggaggccttggctggcacagtgaggaaggaaaat 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 catttgggctgagcattaaagggttgggaggccttggctggcacagtgaggaaggaaaat 621

                                                                       
Query: 422 catcccagaagcaaaggacagcttgggcaaaggctcagaggcaggaagcatgtatggcta 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 catcccagaagcaaaggacagcttgggcaaaggctcagaggcaggaagcatgtatggcta 681

                                                                       
Query: 482 tcctgggctgatctactgtgtttagcaaggccaggcagacatatccaggaaggagcttag 541
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 682 tcctgggctgatctactgtgttcagcaaggccaggcagacatatccaggaaggagcttag 741

                                                                       
Query: 542 ttggagctaggcacaagtacatgaagcaatacttggtgctgtaatagattagatctaacc 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttggagctaggcacaagtacatgaagcaatacttggtgctgtaatagattagatctaacc 801

                                                                       
Query: 602 cacactctcaaggccatcctatctgagagaagttataaagcctaggacacagagtcacac 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 cacactctcaaggccatcctatctgagagaagttataaagcctaggacacagagtcacac 861

                           
Query: 662 agtatgacttgtacta 677
           |||| |||||||||||
Sbjct: 862 agtaggacttgtacta 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)