Query= MSMg01no525_p15.b1 MSMg01no525_p15.b1 CHROMAT_FILE:
MSMg01no525_p15.b1 PHD_FILE: MSMg01no525_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:46 2005
(619 letters)
>mm_chr8_121796709_121797726
Length = 1018
Score = 1017 bits (526), Expect = 0.0
Identities = 581/604 (96%), Gaps = 9/604 (1%)
Strand = Plus / Minus
Query: 7 tccaagttcaaggtgatctgggattaaaggtgtggaggcacacacctttaatctgggcta 66
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 tccaagttcaaggtcatctgggattaaaggtgtggaggcacacacctttaatctgggcta 958
Query: 67 caccttctgttggagacctacataaggacattggaagaaggaagactctctcttcttcgt 126
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 957 caccttctgttggagacctacctaaggacattggaagaaggaagactctctcttcttcgc 898
Query: 127 ctgcttgccttgtgggactgagcaactgctagatccttggacttccattcacagctgctg 186
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 897 ctgcttgccttgtgggactgagcaactgctagatccttggacttccatccacagctgctg 838
Query: 187 ctgaccattgttgggagttagattacagattgtaagtcaccaacaaattcccttactata 246
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 837 ctgaccattgttgggagttagattacagactgtaagtcatcaacaaattcccttactata 778
Query: 247 tagagactacccataaattctgtgactctagagaaccctgactaataccttaggcttgct 306
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 777 tagagactacccataagttctgtgactctagagagccctgactaataccttaggctt-ct 719
Query: 307 tgggggtgggtgtcggtgcccaccgtgagtggcttgctcctaggtgtcctttcaggtgtt 366
|||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 718 tgggggcaggtgttggtgcccactgtgagtggcttgctcctaggtgtcctttcaggtgtt 659
Query: 367 aatgaagactgaactgttccctgtcccctaatgctgtttgcccatggtggtggctcctgg 426
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 658 aatgaagactgaactgttccctgtcccctaaggctgtttgcccatggtggtggctcctgg 599
Query: 427 agtcacctgcagggatcaagggtgcagctcctcagaccatgacactacattctgattttg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 agtcacctgcagggatcaagggtgcagctcctcagaccatgacactacattctgattttg 539
Query: 487 tggatctaggaaggggtttctggctctgaggtttttcctttttccttttttcatcattaa 546
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 538 tggatctaggaaggggtttctggctctgaggtttttc--------ttttttcatcattaa 487
Query: 547 ctttacatttctcagtttgtcacccaggctggtttcaaatctccattgatcctcctgcct 606
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 486 ctttacatttctcagtttgtcacccaggctggtttcaaatctccagtgatcctcctgcct 427
Query: 607 ctgc 610
||||
Sbjct: 426 ctgc 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space: 613872
Effective search space used: 613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_p15.g1 MSMg01no525_p15.g1 CHROMAT_FILE:
MSMg01no525_p15.g1 PHD_FILE: MSMg01no525_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:46 2005
(627 letters)
>mm_chr8_121625738_121626764
Length = 1027
Score = 1174 bits (607), Expect = 0.0
Identities = 622/627 (99%)
Strand = Plus / Plus
Query: 1 ttcccatgtgttaaagggtttacttttagttttgtttgcatttatctgctgtgaggtagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcccatgtgttaaagggtttacttttagttttgtttgcatttatctgctgtgaggtagt 260
Query: 61 tggatagttctagaatgtgtccaaactgaaaacagagaggggtccggaaatacctttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggatagttctagaatgtgtccaaactgaaaacagagaggggtccggaaatacctttgaa 320
Query: 121 aatttatttttatctgtgtgtgtgtgtgtgtgtgtgtgcgtgtgttacactcttgcatgc 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 321 aatttatttttatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttacactcttgcacgc 380
Query: 181 gccggactggccagcaataacgatgctgcaacaggatccttctgctcacgtttattggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccggactggccagcaataacgatgctgcaacaggatccttctgctcacgtttattggga 440
Query: 241 gagcttgattgcagaggtgaagagaccccaagcccagaactggtgctgcttatataggcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagcttgattgcagaggtgaagagaccccaagcccagaactggtgctgcttatataggcc 500
Query: 301 taggagaggtgtgtctcacacctggattggttatgcactatacctcatttgcatgtctca 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 taggagaggtgtgtctcacacccggattggttatgcactatacctcatttgcatgtctca 560
Query: 361 catctgattggttatactctcaaaacctcattatcatgcccgggccaggcagtgtcttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catctgattggttatactctcaaaacctcattatcatgcccgggccaggcagtgtcttgg 620
Query: 421 caaaaagctttactgcatatgtacgcattggttgtttgtccaaacttatgtgtggtggcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaaaagctttactgcatatgtacgcattggttgtttgtccaaacttatgtgtggtggcc 680
Query: 481 agcagtagctagcgccactctgcaacagcacatgtggcttcccacattacacctgtacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcagtagctagcgccactctgcaacagcacatgtggcttcccacattacacctgtacag 740
Query: 541 tttccctcagaagcccatcagagggcctcagattcccccagagctggcattacaggcagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 741 tttccctcagaagcccatcagagggcctcagattcccccagagctggcattccaggcagt 800
Query: 601 tatgaatcatcctgtcatgggtgttgg 627
|||||| ||||||||||||||||||||
Sbjct: 801 tatgaaccatcctgtcatgggtgttgg 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
