Query= MSMg01no526_d16.b1 MSMg01no526_d16.b1 CHROMAT_FILE:
MSMg01no526_d16.b1 PHD_FILE: MSMg01no526_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:05 2005
(633 letters)
>mm_chr8_60840083_60841115
Length = 1033
Score = 1201 bits (621), Expect = 0.0
Identities = 627/629 (99%)
Strand = Plus / Minus
Query: 5 gaattctgattaatttcataaattccctcaaaatagtcacattttaagctggtttaaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 gaattctgattaatttcataaattccctcaaaatagtcacattttaagctggtttaaaat 774
Query: 65 tagactttagtataccattattttctagtaatggggaaagaaaattttaacacaaaacat 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 773 tagactttagtataccattattttctagtaatggggaaagaaaattttaacacaaaccat 714
Query: 125 tacagaatttagttcatcataaaagtaagctattttgttctatagtaattttaatcatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tacagaatttagttcatcataaaagtaagctattttgttctatagtaattttaatcatta 654
Query: 185 ttttatacttgttactattactcgttacactactttgcgtatttaataccttaagtggta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ttttatacttgttactattactcgttacactactttgcgtatttaataccttaagtggta 594
Query: 245 taacctcaataaatcatccccaacaattcttggcttctttagtttgaattctagttcaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 taacctcaataaatcatccccaacaattcttggcttctttagtttgaattctagttcaat 534
Query: 305 gttctcctgttataccacaattggaccatgtgcctagtaatgtttagcagaaattatggt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gttctcctgttataccacaattggaccatgtgcctagtaatgtttagcagaaattatggt 474
Query: 365 gtatcactttgcaggaggaattaaaatatcagagcttatacatgactgtctatatatgct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gtatcactttgcaggaggaattaaaatatcagagcttatacatgactgtctatatatgct 414
Query: 425 ctctcttcctccccctttctctcttcattcagtcttgcaaatagcttcatgccatcaaca 484
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ctctcttccttcccctttctctcttcattcagtcttgcaaatagcttcatgccatcaaca 354
Query: 485 gcaccatccagggaaatgccttcctggtgaggaattgaacagcaaaattgtaccctcagg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gcaccatccagggaaatgccttcctggtgaggaattgaacagcaaaattgtaccctcagg 294
Query: 545 tggcactaaaatttcaactcagctaagtcactctcaaattattgggttggctgttttgag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tggcactaaaatttcaactcagctaagtcactctcaaattattgggttggctgttttgag 234
Query: 605 ccactgccttaagacaactcttttgtggt 633
|||||||||||||||||||||||||||||
Sbjct: 233 ccactgccttaagacaactcttttgtggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_d16.g1 MSMg01no526_d16.g1 CHROMAT_FILE:
MSMg01no526_d16.g1 PHD_FILE: MSMg01no526_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:05 2005
(657 letters)
>mm_chr8_60665529_60666580
Length = 1052
Score = 1210 bits (626), Expect = 0.0
Identities = 647/656 (98%), Gaps = 5/656 (0%)
Strand = Plus / Plus
Query: 1 atccattaagaaacatttatgctatcagttatatagatatctttcattttcaaaaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccattaagaaacatttatgctatcagttatatagatatctttcattttcaaaaaaat- 259
Query: 61 taaagtctatttggatgatgatttttaaatcactttaaaacataaaataagttatagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taaagtctatttggatgatgatttttaaatcactttaaaacataaaataagttatagtta 319
Query: 121 agaaaacaaagattaacccactcacttattagcagtcattcagagattggtaattaattt 180
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 320 agaaaacaaagattaacccactcacttattagcagtca----gagattggtaattaattt 375
Query: 181 tatgtgtatattaccttctaacttatgaattatgttgatattggtaagttcagtgaatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tatgtgtatattaccttctaacttatgaattatgttgatattggtaagttcagtgaatac 435
Query: 241 ctttaagtgcctgacctgctgacttacaagcagagtttttgtcatttcattctctacata 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctttaagtgcctgccctgctgacttacaagcagagtttttgtcatttcattctctacata 495
Query: 301 ggtgcctctttctctgagtacagctcagcagattttgttgaatcttttaaacattaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggtgcctctttctctgagtacagctcagcagattttgttgaatcttttaaacattaaatt 555
Query: 361 ttaaggttctataaactaaggctatggtaaggggagacattagcagtattagaagattgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttaaggttctataaactaaggctatggtaaggggagacattagcagtattagaagattgc 615
Query: 421 ttagaaggtttaacatcatccgtcaatcataaaaataataaggaagcaatcacttcattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttagaaggtttaacatcatccgtcaatcataaaaataataaggaagcaatcacttcattt 675
Query: 481 aatgctacatcagaattaaagtgataatttactcaattaaagggccaggaactagaatac 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 676 aatgctacatcagaattaaagtgatagtttactcaattaaagggccaggaactagaatac 735
Query: 541 ctaaagaacttttatttcactttaagtgcttaggctccagtttcattggtgatagacagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ctaaagaacttttatttcactttaagtgcttaggctccagtttcattggtgatagacagt 795
Query: 601 ttaagtaaaatgtttaacacattctattttcccaaatctaggattaagctgatact 656
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 796 ttaagtaaaatgtttaacacattctattttccaaaatctaggattaagctgatact 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1052
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1042
Effective search space: 674174
Effective search space used: 674174
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
