Query= MSMg01no526_h06.b1 MSMg01no526_h06.b1 CHROMAT_FILE:
MSMg01no526_h06.b1 PHD_FILE: MSMg01no526_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:23 2005
(633 letters)
>mm_chr8_18514876_18515908
Length = 1033
Score = 1180 bits (610), Expect = 0.0
Identities = 622/626 (99%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 5 gaattctccatactggtttctacaatgtctggaccacttgcatcccagcggcagcggatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctccatactggtttctacaatgtctggaccacttgcatcccagcggcagcggatg 265
Query: 65 aggggcctttcccctacactccctccaacatctgttgtcaggtggtcattacctttgcca 124
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 266 aggggcctttcccctacactccctccaacatctgttgtcaggtggtcatcacctttgcca 325
Query: 125 tcctgattggagtaagataaaaatctcaagagttgttttgattcccatacccctaattgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcctgattggagtaagataaaaatctcaagagttgttttgattcccatacccctaattgc 385
Query: 185 tagagagaataaactttttttttaatatttcttagacatttttttcttcctttgaggttt 244
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 386 tagagagaataaactttttttt-aatatttcttagacatttttttcttcctttgaggttt 444
Query: 245 ctagttctacatcttcaggtctgagtacaaataatggagtcacttcagaaaccagaaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctagttctacatcttcaggtctgagtacaaataatggagtcacttcagaaaccagaaaag 504
Query: 305 tagaaaggggtcgcggggtgtggcaggagaacaacagggataggaatagcaaggtgaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagaaaggggtcgcggggtgtggcaggagaacaacagggataggaatagcaaggtgaaag 564
Query: 365 tgatctggtggaaataaaggagtaggaaaaaaggaggggactggaatatagaggagagga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgatctggtggaaataaaggagtaggaaaaaaggaggggactggaatatagaggagagga 624
Query: 425 aggtaaatataaaagaaggagggagagcctacaataacagtaggatgtctgaataggtca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aggtaaatataaaagaaggagggagagcctacaataacagtaggatgtctgaataggtca 684
Query: 485 gaaggaatcataaccatccctaaaaatgcctaggatacatgtaagttagcgtataaacat 544
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 685 gaaggaatcataaccatccctaaaaatgcctaggatacatgtaagttagtgtataaacat 744
Query: 545 atatacatttcagctgaaagtttgtcatctgggctaataatattcccttcaagagtcaaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atatacatttcagctgaaagtttgtcatctgggctaataatattcccttcaagagtcaaa 804
Query: 605 gactgcctatcaaaaaaaaaaaaaaa 630
|||| |||||||||||||||||||||
Sbjct: 805 gactacctatcaaaaaaaaaaaaaaa 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_h06.g1 MSMg01no526_h06.g1 CHROMAT_FILE:
MSMg01no526_h06.g1 PHD_FILE: MSMg01no526_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:23 2005
(612 letters)
>mm_chr8_18674422_18675429
Length = 1008
Score = 1149 bits (594), Expect = 0.0
Identities = 606/612 (99%), Gaps = 4/612 (0%)
Strand = Plus / Minus
Query: 1 tctgtggctgccaggctgtttttgactggagacagagctggacgagggagaggctgggtc 60
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 808 tctgtggctgccaggctgtttttgactggagacagagctggatgagg----ggctgggtc 753
Query: 61 acaggatgctctgctagcctcttagtgaccacaagtgacgaaaaggcagagccaggctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 acaggatgctctgctagcctcttagtgaccacaagtgacgaaaaggcagagccaggctgc 693
Query: 121 agaggagtcagagactaagagacatactaagcaagtcacgacaaggtgacgggtgtctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 agaggagtcagagactaagagacatactaagcaagtcacgacaaggtgacgggtgtctga 633
Query: 181 tgactcctacagcaagcagtatgtttaacagaccctgagtccagatggagtctctgtcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgactcctacagcaagcagtatgtttaacagaccctgagtccagatggagtctctgtcag 573
Query: 241 atcagctggttttctgatgtggtactccgggtctcccaggtagagcagggccaggcacgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 atcagctggttttctgatgtggtactccgggtctcccaggtagagcagggccaggcacgg 513
Query: 301 ctttctctcctacttatctgccaggcagttctgtcatgaagtcagaaaaacaaggataac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctttctctcctacttatctgccaggcagttctgtcatgaagtcagaaaaacaaggataac 453
Query: 361 tgtctttccagacatcagagtgaacaccagggaaattagtgctctgtgaacacacaggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgtctttccagacatcagagtgaacaccagggaaattagtgctctgtgaacacacaggca 393
Query: 421 tcactagccatgtgctcaaatggggaaataaagattaggcaaaaattcataccaaactgg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 392 tcactagccatgtgctcaaatggggaaataaagattaggcaaaaattcataccaaagtgg 333
Query: 481 tttacaaaatcagagtttttgcgactgactggccacaggcagccatctgactttgaagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tttacaaaatcagagtttttgcgactgactggccacaggcagccatctgactttgaagga 273
Query: 541 ctgctacaatggtctttcacagagatttcccgagaacactacacaaaccctgaaataaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctgctacaatggtctttcacagagatttcccgagaacactacacaaaccctgaaataaaa 213
Query: 601 acattctcagaa 612
||||||||||||
Sbjct: 212 acattctcagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1008
Length adjustment: 10
Effective length of query: 602
Effective length of database: 998
Effective search space: 600796
Effective search space used: 600796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
