Query= MSMg01no526_l16.b1 MSMg01no526_l16.b1 CHROMAT_FILE:
MSMg01no526_l16.b1 PHD_FILE: MSMg01no526_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:44 2005
(410 letters)
>mm_chr8_89700229_89701038
Length = 810
Score = 656 bits (339), Expect = 0.0
Identities = 390/407 (95%), Gaps = 4/407 (0%)
Strand = Plus / Plus
Query: 5 gaattctggaggtgttttgtttgtctttttttttttcttctttttttttttttagcatat 64
||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||
Sbjct: 207 gaattctggaggtgttttgtttgtctttttttttt-cttcttcttttttttt-agcatat 264
Query: 65 tgcattctccagcagtgttcttcagaaaggatgatctccctaggatggacatttctattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcattctccagcagtgttcttcagaaaggatgatctccctaggatggacatttctattt 324
Query: 125 catctctctgttctcgtccaccccttctttttggaaacagtgggctggcttagatttgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catctctctgttctcgtccaccccttctttttggaaacagtgggctggcttagatttgca 384
Query: 185 ggttcacgaatttccctggctgctgctgcactgggtggtaacaagaatgaacatgctcat 244
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggttcaagaatttccctggctgctgctgcactgggtggtaacaagaatgaacatgctcat 444
Query: 245 gtagtgcagatttgtctgggatgaagtggaatatgggaaagcttcttggaaagaggagga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtagtgcagatttgtctgggatgaagtggaatatgggaaagcttcttggaaagaggagga 504
Query: 305 gg-gtgaggaagaagagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga 363
|| | |||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 505 ggag-gaggaagaagagaagaagaagaagaagaagaagaaggagaaggagaaggagaagg 563
Query: 364 agaagaagaagaagaagaagaagaagaataagaagaagaagaagaag 410
||||| ||||| ||||| ||||| |||| ||||| |||||||||||
Sbjct: 564 agaaggagaaggagaaggagaaggagaaggagaaggagaagaagaag 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 128
Number of extensions: 34
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 33
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_l16.g1 MSMg01no526_l16.g1 CHROMAT_FILE:
MSMg01no526_l16.g1 PHD_FILE: MSMg01no526_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:45 2005
(638 letters)
>mm_chr8_89781971_89783008
Length = 1038
Score = 557 bits (288), Expect = e-162
Identities = 309/316 (97%)
Strand = Plus / Minus
Query: 1 tccctcagaagcctaggactcaagacagcatcaagactgctggtgctttggcccatgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tccctcagaagcctaggactcaagacagcatcaagactgctggtgctttggcccatgagt 257
Query: 61 ctgccctgtagagttggcgcttgtctgtctctgtagtcaagtaaatcatagtgttatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ctgccctgtagagttggcgcttgtctgtctctgtagtcaagtaaatcatagtgttatttt 197
Query: 121 tcttaacatctttctccacccttatctcttccatcccccacaaaaaaacactcagtaggg 180
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 196 tcttaacatctttctccacccttatctcttccatcccccgcaaaagaacactcagtaggg 137
Query: 181 ggacaaaaagggttagagaggaaagggggcattgatattgttggactacttcctactgat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 136 ggacaaaaagggttagagaggaaagggggcattgatattgttggactacttcctgctgat 77
Query: 241 taggggcatggagttcctttgggcaagtccagttttcatctttggggtatctccaaacag 300
||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 76 taggggcatcaagttcctttgggcaagtccaattttcatcttcggggtatctccaaacag 17
Query: 301 caatcagcaatccagc 316
||||||||||||||||
Sbjct: 16 caatcagcaatccagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
