GAGCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGTATTTCTATCTGATAGAAGCGGATCCAGGGCCACTCTATGG
TTTCAAACCTAGCAACACATTCACTTCATGCGCTTTCTAAAGTTACAACA
CAGTCTTTTCTTCAAACACATTGCATTAGTTCTGATCTTCGTGTTAGATA
ATATTAAAGTTCTACCCCAGTGATAGAGGTAGAATACGATGTGGAAATTC
TTACATTCTTAAGTACTGTTTTATATATAGTCATTTAACAGATTAAAAAA
AGTTTGGAGAGGAAAGGGTATTCCATCATCATCATCTGACTGTCTGAGGC
CAGGAGCCCGGGGCCTACCAGCTTCTTCATAAATAAAGCATAATCTATAT
TGCTCAGAGGGTTGTGTAAAGATCAGATGAAATAGTATGTGTGACATTCT
ACATAATAGTCCTTGTTCTGGTCTCTTTGTTTTGGCCTTCAATATTACCT
GGGGAGGGTCTTCATTCTGCTAAAGTACAATGAAATTATCTAGTAAGAAC
AGAACATGGACTGCTTAATGTCTACTTTGCTGCTGTTTTTAAATGCCAGT
GAACATACATATAAGCTCTGGATAGGGGTAGAGTCTGCCTCTTCCACTAC
TTCATACGCTCAGGGTTTAATGAAACATCTTCATACAGTTGATAATCAGT
AGATTACATAGTTATCTGTAATTTTTATAAAAGACATCAAGGATCTTCCA
C

TCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTACTTTACACTCCCTGTGTC
TTCTGTCCTCTCTCTAGCTGTTGTATGAGTCTGGATCTGTGCCTGCTGCC
TGGAGGCTGTCTTGTAAATCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTG
TGTGTATCTGTGTGTATATATCTGTGTATATGCATCTCTCTGTGTTTGTG
TATCTGTGTGTGTTTATATGTATATATATATATATATGTATATATATGTG
TATATATATATACATATATATATATATATTTGTGTGCGTATATCAGTGTA
TGTTTTGTGAGCCCACACACAGAGAATGTAATTATTATGTATGTACATGT
ATAAAATGCGAGTTGTTTATATATGAGACTTATTGTGACTGAGATAAAAT
AATAGTTAGCGTGAGTGTGAGAGAGATACGCTTATATTATATTCATCCTG
ATATATAATATATATATTTAGAATTATATAAATACATATAATTTACGTTA
CTTAGTGTTTTGTAATATTATGCCACAATATTTCTTTTTTTATTATATAA
AGAACGGGTTCTTTTATTCTTCCTCAATCCACGTTATTTCTATTTTTTTT
AAGATGAGTAATTCACTTTTATTTTTTATCCCCTCTGCCCATTTTTCAAC
AACTTATCCTTTTGCGGTCTGTTGGATGTACAAAATTTATTT

Query= MSMg01no527_e11.b1 MSMg01no527_e11.b1 CHROMAT_FILE:
MSMg01no527_e11.b1 PHD_FILE: MSMg01no527_e11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:28 2005
         (660 letters)



>mm_chr8_47704588_47705647
          Length = 1060

 Score = 1239 bits (641), Expect = 0.0
 Identities = 656/661 (99%), Gaps = 2/661 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagaagcggatccagggccactctatggtttcaaacctagcaacacattcacttcatgc 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagaagcgggtccagggccactctatggtttcaaacctagcaacacattcacttcatgc 260

                                                                       
Query: 61  gctttctaaagttacaacacagtcttttcttcaaacacattgcattagttctgatcttcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctttctaaagttacaacacagtcttttcttcaaacacattgcattagttctgatcttcg 320

                                                                       
Query: 121 tgttagataatattaaagttctaccccagtgatagaggtagaatacgatgtggaaattct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttagataatattaaagttctaccccagtgatagaggtagaatacgatgtggaaattct 380

                                                                       
Query: 181 tacattcttaagtactgttttatatatagtcatttaacagattaaaaaaagtttggagag 240
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacattcttgagtactgttttatatatagtcatttaacagattaaaaaaagtttggagag 440

                                                                       
Query: 241 gaaagggtattccatcatcatcatctgactgtctgaggccaggagcccggggcctaccag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaagggtattccatcatcatcatctgactgtctgaggccaggagcccggggcctaccag 500

                                                                       
Query: 301 cttcttcataaataaagcataatctatattgctcagagggttgtgtaaagatcagatgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttcttcataaataaagcataatctatattgctcagagggttgtgtaaagatcagatgaa 560

                                                                       
Query: 361 atagtatgtgtgacattctacataatagtccttgttctggtctctttgttttggccttca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atagtatgtgtgacattctacataatagtccttgttctggtctctttgttttggccttca 620

                                                                       
Query: 421 atattacctggggagggtcttcattctgctaaagtacaatgaaattatctagtaagaaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atattacctggggagggtcttcattctgctaaagtacaatgaaattatctagtaagaaca 680

                                                                       
Query: 481 gaacatggactgcttaatgtctactttgctgctgtttttaaatgccagtgaacatacata 540
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 gaacatggactgcttaatgtctaccttgctgctgtttttaaatgccagtgaacatacata 740

                                                                       
Query: 541 ta-agctctggataggggtagagtctgcctcttccactacttcatacgctcagggtttaa 599
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 -acagctctggataggggtagagtctgcctcttccactacttcatacgctcagggtttaa 799

                                                                       
Query: 600 tgaaacatcttcatacagttgataatcagtagattacatagttatctgtaatttttataa 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgaaacatcttcatacagttgataatcagtagattacatagttatctgtaatttttataa 859

            
Query: 660 a 660
           |
Sbjct: 860 a 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)