Query= MSMg01no529_e10.b1 MSMg01no529_e10.b1 CHROMAT_FILE:
MSMg01no529_e10.b1 PHD_FILE: MSMg01no529_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:10 2005
(706 letters)
>mm_chr8_58413525_58414634
Length = 1110
Score = 1338 bits (692), Expect = 0.0
Identities = 701/706 (99%), Gaps = 4/706 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggaaaattgcatccctgtgagagtagtagggaacatggcaggttgaagtcttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggaaaattgcatccctgtgagagtagtagggaacatggcaggttgaagtcttc 264
Query: 65 tctctccaataacttttgctgactttatacctttgcagagagaccctatatggatcttgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctctccaataacttttgctgactttatacctttgcagagagaccctatatggatcttgt 324
Query: 125 aaactttaggagcttcctgacacttgtgaatggataagttcctgaaccttggatagtttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaactttaggagcttcctgacacttgtgaatggataagttcctgaaccttggatagtttt 384
Query: 185 tctttacatttgactcttaaagagacttccttctgaatgaaatatttcaattcaaaggaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctttacatttgactcttaaagagacttccttctgaatgaaatatttcaattcaaaggaa 444
Query: 245 atgagtcaaaatttatccatgttgaaaatttctaataacaacataatcaaaataaaatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgagtcaaaatttatccatgttgaaaatttctaataacaacataatcaaaataaaatgt 504
Query: 305 atatccaaccacaagatttacaccataaatattgtctgtggtgcatggtacagaatgtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atatccaaccacaagatttacaccataaatattgtctgtggtgcatggtacagaatgtgt 564
Query: 365 taaagttttcaaacaccaattaagataaacctataataaaactctacactagccaaacct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaagttttcaaacaccaattaagataaacctataataaaactctacactagccaaacct 624
Query: 425 cttttgaaaaactgacttctacatgtcttccataagtagaagaaagcaagtataattctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cttttgaaaaactgacttctacatgtcttccataagtagaagaaagcaagtataattctt 684
Query: 485 ggattatatctgagaagtaaatttgtccaaaagaaatttaattgagttgtaattattcaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggattatatctgagaagtaaatttgtccaaaagaaatttaattgagttgtaattattcaa 744
Query: 545 agccacttgaaaaccatgaataagatttccaaacacagacgactgttgacaacacatcaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agccacttgaaaaccatgaataagatttccaaacacagacgactgttgacaacacatcaa 804
Query: 605 tatttaacttaaatttgcaccacatatgatcttataatatgtttgtgtgtgtatgtgtat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tatttaacttaaatttgcaccacatatgatcttataatatgtttgtgtgtgtatgtgtat 864
Query: 665 gagagagaga----gagcgaagattaaacattgataaagcattaat 706
|||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 865 gagagagagaaagagagcgaagattaaacattgataaggcattaat 910
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1110
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1100
Effective search space: 765600
Effective search space used: 765600
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no529_e10.g1 MSMg01no529_e10.g1 CHROMAT_FILE:
MSMg01no529_e10.g1 PHD_FILE: MSMg01no529_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:10 2005
(671 letters)
>mm_chr8_58556400_58557470
Length = 1071
Score = 1218 bits (630), Expect = 0.0
Identities = 660/670 (98%)
Strand = Plus / Minus
Query: 2 ttccatactatctctcctctgaacagttctcattagacacctgaaaaaagttatttccca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 ttccatactatctctcctctgaacagttctcattagacacctgaaaaaagttatttccca 812
Query: 62 ttattattataggaaatgacctctcatcccacgtaggatcttttctccaattactttctc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ttattattataggaaatgacctctcatcccacgtaggatcttttctccaattactttctc 752
Query: 122 tgctatagactattcacctcttctctctaatgaaattaaacaaatatatcttcaaagtaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tgctatagactattcacctcttctctctaatgaaattaaacaaatatatcttcaaagtaa 692
Query: 182 tatcttgagtaaatgaaaactttaaacatcatcagatcatttaaagttgacatgaacata 241
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 691 tatcttgagtaaatgaaaactttaaacatcatcagattgtttaaagttgacatgaacata 632
Query: 242 cccttataaagaaaagaaaaaattaaataaatattgaaagatagaaatgcgcaaacagtg 301
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 631 cccttataaagaaaagaaaaaattgaataaatattgaaagatagaaatgcgcaaacagtg 572
Query: 302 aaacacaatggtcttgtgcagaagttcacatgattgtgaaacttctctattaaaattgtt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaacacaatggtcttgtgcagaagttcacatgattgtgaaacttctctattaaaattgtt 512
Query: 362 ctgtaactttaacacaatttaaatgaaagttttattatgatcctcaactggtagttagtc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ctgtaactttaacacaatttaaatgaaagttttattatgatcctcaactggtagttagtc 452
Query: 422 aaagtatgaaaataaacaccatggtgccagttgggagaacagtgtagacctgctaaatct 481
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaaggataaaaataaacaccatggtgccagttgggagaacagtgtagacctgctaaatct 392
Query: 482 atttatctagataaataaagctgtagtctttaaatgatttaaaatgaccaagtaaagaat 541
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 391 atttatctagataaataaagctgtagtctttaaatgattttaaacgaccaagtaaagaat 332
Query: 542 tagttcagactagaactcagaatcaggcctatgaagggagacttaaggtaaaagtcacat 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tagttcagactagaactcagaatcaggcctatgaagggagacttaaggtaaaagtcacat 272
Query: 602 tttaaatcagggtggaaaattagataagtattaatggggaaatattctatattcctacaa 661
|||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 271 tttaaatcagggtgaaaaatgagataagtattaatggggaaattttctatattcctacaa 212
Query: 662 agtaaaaaaa 671
||||||||||
Sbjct: 211 agtaaaaaaa 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
