Query= MSMg01no529_h14.b1 MSMg01no529_h14.b1 CHROMAT_FILE:
MSMg01no529_h14.b1 PHD_FILE: MSMg01no529_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:27 2005
(707 letters)
>mm_chr8_64256446_64257553
Length = 1108
Score = 1307 bits (676), Expect = 0.0
Identities = 697/704 (99%), Gaps = 1/704 (0%)
Strand = Plus / Plus
Query: 5 gaattcctagctcttacccagaaggataacagtgttaggttaaggcagttgaatacatgt 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctagctcctaaccagaaggataacagtgttaggttaaggcagttgaatacatgt 264
Query: 65 agagctctccaactcattttttttaacacggttgttggcatgactgcatggtatctatta 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 agagctctccaactcattttttttaacacggttgttggcatgactgcgtggtatctatta 324
Query: 125 ttatttattaccatcattatttatttattgtgtacatactacttatgtggtatcactgcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttatttattaccatcattatttatttattgtgtacatactacttatgtggtatcactgcc 384
Query: 185 atcttttaagattgtctttggctatgtaccaatgaattagtataatctacttcccttact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcttttaagattgtctttggctatgtaccaatgaattagtataatctacttcccttact 444
Query: 245 tttatcattatgaatgctcatcttcaaagccagtatgactggggcacactccaggtcctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttatcattatgaatgctcatcttcaaagccagtatgactggggcacactccaggtcctc 504
Query: 305 agaaaacttggggtaatcccagcgactcattatttctaattaccctgtatctggaagtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agaaaacttggggtaatcccagcgactcattatttctaattaccctgtatctggaagtgt 564
Query: 365 agtgctgagctcactccacacagcagccaa-ggaagtaggactcatctcactactgcctt 423
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 565 agtgctgagctcactccacacagcagccaaaggaggtaggactcatctcactactgcctt 624
Query: 424 cccctcaaatagaaatatgtgtattttacaacctcaccctttcagccaatgcctaaaacc 483
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 625 cccctcaaatagaaatatgtgtattttacaacctcaccctttcagccaatgcgtaaaacc 684
Query: 484 tgtgactatttctggcattgttatctggaacacaggatgcagcatgattactgagtgttg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgtgactatttctggcattgttatctggaacacaggatgcagcatgattactgagtgttg 744
Query: 544 acacacacccaaaagaggaggaaaagatgaagctaataggcaatgattagggttggggac 603
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acacacgcccaaaagaggaggaaaagatgaagctaataggcaatgattagggttggggac 804
Query: 604 agtatgctgagctgagagactctgaaaagactcatggtctatgtttgctgatgaagcatg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agtatgctgagctgagagactctgaaaagactcatggtctatgtttgctgatgaagcatg 864
Query: 664 gctatgaaaagcatggtacctaatttgggacagtcacttccgta 707
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gctatgaaaagcatggtacctaatttgggacagtcacttccgta 908
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 1108
Length adjustment: 10
Effective length of query: 697
Effective length of database: 1098
Effective search space: 765306
Effective search space used: 765306
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no529_h14.g1 MSMg01no529_h14.g1 CHROMAT_FILE:
MSMg01no529_h14.g1 PHD_FILE: MSMg01no529_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:27 2005
(661 letters)
>mm_chr8_64441816_64442877
Length = 1062
Score = 1216 bits (629), Expect = 0.0
Identities = 651/659 (98%), Gaps = 3/659 (0%)
Strand = Plus / Minus
Query: 1 aaaccactacacgcacataagtaataaaggaagacatctatggaaagaacccatcaatgg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 858 aaaccactacacgcacataagtaataaatgaagacatctatggaaagaacccatcaatgg 799
Query: 61 gatgagcaaataacaattcaataagaaatagcaaacagagctttttataataataaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gatgagcaaataacaattcaataagaaatagcaaacagagctttttataataataaaatg 739
Query: 121 ttgacagaaacatacatgtgcctttgtgctcttggacttaatacaatccttctttggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttgacagaaacatacatgtgcctttgtgctcttggacttaatacaatccttctttggctt 679
Query: 181 aggaccttgagttgtgatggtctttgaagtgactgattctaatgactccccataaaatcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aggaccttgagttgtgatggtctttgaagtgactgattctaatgactccccataaaatcg 619
Query: 241 ttgaaaactatgatacttctgcaaacttttaagatgattggggtctcttctgtctgagaa 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 618 ttgaaaactatgatacttctgcaaccttttaagatgattggggtctcttctgtctgagaa 559
Query: 301 aagaaaaaaaac--atatacaatttctacggtttcttagtagcatctctctaaatcttca 358
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aagaaaaaaaacttatatacaatttctacggtttcttagtagcatctctctaaatcttca 499
Query: 359 caccattctatatacaaacagtattctttctattatagaacagtaattttatataatcag 418
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cgccattctatatacaaacagtattctttctattatagaacagtaattttatataatcag 439
Query: 419 ctttgtcagagaaggtatcttaaattaggcactctcattcaaagaataacttttaatata 478
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttttgtcagagaaggtatcttaaattaggcactctcattcaaagaataacttttaatata 379
Query: 479 tctaaaagagcgacaattttctaaactttttttttttggtctatggaattaaacctagta 538
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 378 tctaaaagagcgacaattttctaaactttttttttt-ggtctatggaattaaacctagta 320
Query: 539 atccatgcacacaggttaaggacgctaccactggtcagcaactcccagaagctctaacac 598
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 319 atccatgcacacaggttaaggacgctaccactggtcaacaactcccagaagctctaacac 260
Query: 599 ttccaagacaatttttcatagcctacttccaaaagaaataccaagtatattgttttaat 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttccaagacaatttttcatagcctacttccaaaagaaataccaagtatattgttttaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1062
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1052
Effective search space: 684852
Effective search space used: 684852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
