NAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTGTTCTGTTCTGAGCCCCATTTTTTAATGGGGTTATTTG
ATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGT
CCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGG
TCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTT
TCATTAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTGCT
GTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCC
CACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCT
TGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATT
CGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAA
AATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCA
AGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCAT
TGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAAT
TGCTCTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTC
TTTTATTCTTGAGAAAACTTTTTGCTACCCTAGGATTTTTGTTA

NCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTCTCCTGGCAGTCATTAGTTGC
CTGTAGGTCATTTGTCTAGGAGCGTGACTACTTGAAATACCTCTTTTTAA
CATGTCTTTTGATATTGCCTTCATTATAGACTTTTTTTATGCAGCCATTT
CTGGGAGCAATCTATTTGCGGCAGACTTCCTGATATAAAGTCATGATTCC
TGAGTACTTTGGAAGCATGTTATTTGCTTGCTTCTTTGTTTTGGTGACAA
GTTCTTTTTGTAAAAGTATGATTCAGAAGAGGGTCCATTCTAGTGGTTTT
TTTTTTCTTTCTGATCATCAGGCTGTGAAAAGAGACTCACATTTAAATTG
CATTATTGTGAAAGCTGTGGGCCCTGGGGCTCTATAAAGATTCTGAAAAA
CATTTAGCAAGAAATGAAGTACTTACTAGCTGTGCAGGCTGGGAAGGAGA
CTCAGCAGACATACTATCAAATATCTAACAATCATCCTTCTTCCTAAAGG
AGAAGCAGAGACTGGACTGAGATTTGTTATCTCCTTCCTTGTAAGATGGT
TTAAACCACCCAAAACAGCGTGTATATGAGCCCTGATAACGGGCGATGGA
TACGTTTCCAGAGGACTCCTCGCTAGAAATGATTTAGGAGTGTGAAATCA
TGACAACACCAGTTCCCTTGGTACCATCTTTACTCTCTAATG

Query= MSMg01no529_m03.g1 MSMg01no529_m03.g1 CHROMAT_FILE:
MSMg01no529_m03.g1 PHD_FILE: MSMg01no529_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:51 2005
         (616 letters)



>mm_chr8_43491584_43492599
          Length = 1016

 Score = 1176 bits (608), Expect = 0.0
 Identities = 614/616 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctctcctggcagtcattagttgcctgtaggtcatttgtctaggagcgtgactacttgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctcctggcagtcattagttgcctgtaggtcatttgtctaggagcgtgactacttgaa 260

                                                                       
Query: 61  atacctctttttaacatgtcttttgatattgccttcattatagactttttttatgcagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atacctctttttaacatgtcttttgatattgccttcattatagactttttttatgcagcc 320

                                                                       
Query: 121 atttctgggagcaatctatttgcggcagacttcctgatataaagtcatgattcctgagta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttctgggagcaatctatttgcggcagacttcctgatataaagtcatgattcctgagta 380

                                                                       
Query: 181 ctttggaagcatgttatttgcttgcttctttgttttggtgacaagttctttttgtaaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttggaagcatgttatttgcttgcttctttgttttggtgacaagttctttttgtaaaag 440

                                                                       
Query: 241 tatgattcagaagagggtccattctagtggttttttttttctttctgatcatcaggctgt 300
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 tatgattcagaagagggtccattctagtgtttttttttttctttctgatcatcaggctgt 500

                                                                       
Query: 301 gaaaagagactcacatttaaattgcattattgtgaaagctgtgggccctggggctctata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaaagagactcacatttaaattgcattattgtgaaagctgtgggccctggggctctata 560

                                                                       
Query: 361 aagattctgaaaaacatttagcaagaaatgaagtacttactagctgtgcaggctgggaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagattctgaaaaacatttagcaagaaatgaagtacttactagctgtgcaggctgggaag 620

                                                                       
Query: 421 gagactcagcagacatactatcaaatatctaacaatcatccttcttcctaaaggagaagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagactcagcagacatactatcaaatatctaacaatcatccttcttcctaaaggagaagc 680

                                                                       
Query: 481 agagactggactgagatttgttatctccttccttgtaagatggtttaaaccacccaaaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agagactggactgagatttgttatctccttccttgtaagatggtttaaaccacccaaaac 740

                                                                       
Query: 541 agcgtgtatatgagccctgataacgggcgatggatacgtttccagaggactcctcgctag 600
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agcgtgtatatgagccctgagaacgggcgatggatacgtttccagaggactcctcgctag 800

                           
Query: 601 aaatgatttaggagtg 616
           ||||||||||||||||
Sbjct: 801 aaatgatttaggagtg 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)