Query= MSMg01no529_p02.b1 MSMg01no529_p02.b1 CHROMAT_FILE:
MSMg01no529_p02.b1 PHD_FILE: MSMg01no529_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:05 2005
(640 letters)
>mm_chr8_7630149_7631188
Length = 1040
Score = 1210 bits (626), Expect = 0.0
Identities = 632/634 (99%)
Strand = Plus / Plus
Query: 5 gaattcctcaataatcacctttccactagtgaatatgttatcttcatattgagtttgtct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcaataatcacctttccactagtgaatatgttatcttcatattgagtttgtct 264
Query: 65 aattttgtcactgttctgtttatggaatcattcaatagtggttgtaattcagctaatcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattttgtcactgttctgtttatggaatcattcaatagtggttgtaattcagctaatcat 324
Query: 125 tgggttaactttaaaactatactaaatgctagcatgggtcaaactgtgtctttgtatgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgggttaactttaaaactatactaaatgctagcatgggtcaaactgtgtctttgtatgtg 384
Query: 185 gcaaatctttctattttaagtgtccatatgctgggtagcagtttcctctgaaatgaatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcaaatctttctattttaagtgtccatatgctgggtagcagtttcctctgaaatgaatca 444
Query: 245 tttcatttagcagggtaactcaccaagtgcaggataccataaaggccagtccaatagtcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttcatttagcagggtaactcaccaagtgcaggataccataaaggccagtccaatagtcc 504
Query: 305 atcctgcagagaaactctttaaaaagcagccaatagctctttaaaacccaagaactccaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcctgcagagaaactctttaaaaagcagccaatagctctttaaaacccaagaactccaa 564
Query: 365 accttcaggatgtccgtgaaactgagcaaattcacccagttcctctctctcctgcctgat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accttcaggatgtccgtgaaactgagcaaattcacccagttcctctctctcctgcctgat 624
Query: 425 attagcactgctgagagaaacactatgacctgacaagtcaaattgccttgacttgtctat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attagcactgctgagagaaacactatgacctgacaagtcaaattgccttgacttgtctat 684
Query: 485 gaccagccaagctacctgaatgaaatggagaatagatgagctgtctggacaaagacctac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaccagccaagctacctgaatgaaatggagaatagatgagctgtctggacaaagacctac 744
Query: 545 agaactgcccagaggaagcagaaccaactaaactacttagaacgccactctctaacatgt 604
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 745 agaactgcccagaggaagcagaaccaactaaacaacttagaacaccactctctaacatgt 804
Query: 605 agaactgactgcgtgttgcacagtgcactctaga 638
||||||||||||||||||||||||||||||||||
Sbjct: 805 agaactgactgcgtgttgcacagtgcactctaga 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_p02.g1 MSMg01no529_p02.g1 CHROMAT_FILE:
MSMg01no529_p02.g1 PHD_FILE: MSMg01no529_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:05 2005
(605 letters)
>mm_chr8_7820403_7821407
Length = 1005
Score = 1067 bits (552), Expect = 0.0
Identities = 591/604 (97%)
Strand = Plus / Minus
Query: 1 agtttaaaaccctctattcaaattcaatttagttggtgggagaaacagtaagtagagaga 60
||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 672 agtttaaaaccctttattcaaattcagtttagttggtgggagaaacagtaagtaaagaga 613
Query: 61 agtgaggttgttacatgtcatttttaaaagtaggaaaaagcacctcccatttttaaagtt 120
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agtgaggttggtacatgtaatttttaaaagtaggaaaaagcacctcccatttttaaagtt 553
Query: 121 acttagtttatccctaatgttttatgatattttaacagatataacagacagaaaattata 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 552 acttagtttatcactaatgttttatgatattttaacagatataacagacagaaacttata 493
Query: 181 ttccacactttatatcacagttatcccagttcacttttgtgctaaggcagagttctaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttccacactttatatcacagttatcccagttcacttttgtgctaaggcagagttctaccc 433
Query: 241 caagggagctgcagaaaggcagtggcctctggggcatgtaaaggattcactgatttgact 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 432 caagggagctgcagaaaggcagtggcctctggggtatgtaaaggattcactgatttgact 373
Query: 301 tctttctctactgtccttccccaattccctcacttctgagatctagcttccttcaagagg 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tctttctctattgtccttccccaattccctcacttctgagatctagcttccttcaagagg 313
Query: 361 ctgcaaagatttcctagactccagatgttgcccaagacagtggagacatttggaccagtg 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 312 ctgcaaagatttcctagactccagatgttgcccaagacagtggagacgtttggaccagtg 253
Query: 421 gtgtgtaccatctctccatgcttcatgtcagtgtactgattataagacacactggtttga 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 252 gtgtgtaccatctctccatgcttcatgtcagtttactgattataagacacactggtttga 193
Query: 481 ataagagtagcccccactggctcatatatttgaatttttgatttccaattagtggcatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ataagagtagcccccactggctcatatatttgaatttttgatttccaattagtggcatca 133
Query: 541 ttttggaaggagtcggaggtgctacttgctggagaatgtatgttgttagggaatgctttg 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 132 ttttggaaggagtcggaggtgctacttgctggagaatgtatgttgctagggaacgctttg 73
Query: 601 aagg 604
||||
Sbjct: 72 aagg 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
