Query= MSMg01no529_p14.b1 MSMg01no529_p14.b1 CHROMAT_FILE:
MSMg01no529_p14.b1 PHD_FILE: MSMg01no529_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:08 2005
(617 letters)
>mm_chr8_67591037_67592053
Length = 1017
Score = 1065 bits (551), Expect = 0.0
Identities = 593/613 (96%), Gaps = 11/613 (1%)
Strand = Plus / Plus
Query: 5 gaattcaggagttggaggcaggaggatctgaaatttgagttctccacacctacatagtga 64
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 216 gaattcaggagttggaggcaggaggatctgaaatttgagttctccacacgtacatagtga 275
Query: 65 atttaaggccagccagggctacaggagattctgcctccaaatacaaaacaccataaaaca 124
|||||||||||||||||| ||||||||| ||||||||||||||||||||| |||
Sbjct: 276 atttaaggccagccagggttacaggaga-------tccaaatacaaaacaccataagaca 328
Query: 125 aagccaaaatccaaataactattcttttttttttttttaggctggtcctgggggcatgca 184
||||||||||||||||||||| || | ||||||| | ||||||||||||||||||||
Sbjct: 329 aagccaaaatccaaataactagtc----tgtttttttcatgctggtcctgggggcatgca 384
Query: 185 gctttaatctcagcaatctggaggtggaggcaggcaaatctatgagttcaaggccagcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctttaatctcagcaatctggaggtggaggcaggcaaatctatgagttcaaggccagcct 444
Query: 245 acagattgagttccagagcagctagagctacacaaaccctgtctcaaaagacccaaatac 304
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagattgagttccagagcagccagagctacacaaaccctgtctcaaaagacccaaatac 504
Query: 305 ataaataaattaaaataataaaatgataaaaatgaaacaaactttaaaatttgtttcatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ataaataaattaaaataataaaatgataaaaatgaaacaaactttaaaatttgtttcatc 564
Query: 365 aatgcatcagaaagtgaggggaaaggtttgacttctggtggatctctggccacccttcac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatgcatcagaaagtgaggggaaaggtttgacttctggtggatctctggccacccttcac 624
Query: 425 tggtgttggggatggaatcaggatctgtatgttgaggatatgtagtatatatgcatatgt 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 tggtgttggggatggaatcaggatctatatgttgaggatatgtagtatatatgcatatgt 684
Query: 485 agtagtgacactccccacattttgtgtcctctgccttcctgctgggttatatctgttggc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtagtgacactccccacattttgtgtcctctgccttcctgctgggttatatctgttggc 744
Query: 545 cttagtttggagaattcatggtgactcagcataatattgccaatactttcagagtacgcc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttagtttggagaattcatggtgactcagcataatattgccaatactttcagagtacgcc 804
Query: 605 tgaatggaaagtt 617
|||||||||||||
Sbjct: 805 tgaatggaaagtt 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_p14.g1 MSMg01no529_p14.g1 CHROMAT_FILE:
MSMg01no529_p14.g1 PHD_FILE: MSMg01no529_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:08 2005
(666 letters)
>mm_chr8_67672337_67673402
Length = 1066
Score = 1222 bits (632), Expect = 0.0
Identities = 650/656 (99%)
Strand = Plus / Minus
Query: 1 tgttccacctctcactgaacctagagctcaccaattggtctagaggggctggcaaggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 tgttccacctctcactgaacctagagctcaccaattggtctagaggggctggcaaggcag 970
Query: 61 ccaacacccaccttcctgtctaaccacaagccctggagtgaaagacacttgcctggtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ccaacacccaccttcctgtctaaccacaagccctggagtgaaagacacttgcctggtttt 910
Query: 121 tactgcgactcccaactcaggtactcatgcttgagaggcaagcacatagtgctaagcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 tactgcgactcccaactcaggtactcatgcttgagaggcaagcacatagtgctaagcaat 850
Query: 181 ctcccccaaatctgaagctccctttaagtcatataagtatatgagaagctctaactgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ctcccccaaatctgaagctccctttaagtcatataagtatatgagaagctctaactgaaa 790
Query: 241 aacccagacacactggaaatttgtccaagaaaatatatttacactccaaacagaacctac 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 789 aacccagacacactggaaatttgtccaagaaaatatatttacactccaaaaagaacctac 730
Query: 301 tgctaagtcgtctttgaagttcagttatggccaaaccaccaaatctgaagaaagacacac 360
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 729 tgctaagtcatctttgaagttcaattatggccaaaccaccaaatctgaagaaagacacac 670
Query: 361 acatactaaatgtgtaaacatttaatccactaacgctggcaaagctgcctgcagggagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 acatactaaatgtgtaaacatttaatccactaacgctggcaaagctgcctgcagggagtc 610
Query: 421 tagagtctgtttcccatcgtctgaagctctgaatgcagccttgctccctgagcaaggacc 480
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 609 tagagtctgtttcccatagtctgaagctctgaatgcagccttgctccctgggcaaggacc 550
Query: 481 tacagccacatccaggctgtgctcagctggagatagagttcctcctccgctcagtctttc 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tacagccacatcctggctgtgctcagctggagatagagttcctcctccgctcagtctttc 490
Query: 541 ctcctggaaggcatgcttactaggtagcctgtgaagtaagtcactggaaagttttatttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctcctggaaggcatgcttactaggtagcctgtgaagtaagtcactggaaagttttatttt 430
Query: 601 tgttagcaaaacaaaaacgcttattccttttctattgctggttaaaaaaaaaaaaa 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgttagcaaaacaaaaacgcttattccttttctattgctggttaaaaaaaaaaaaa 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
