CCCTTCTTTTTTTTTTTAATTTNANNNGGGGGCGGGGNCGGNNNACTTAT
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
TACTGTCTTCCATGGGGTTTGCAAAAATAGTAGACAGAGATAACCAAGAA
TTGGAGTACCAGAGATTATCCGTACCAGAACTTAATTGGCTGGACTGCAG
ATCCAGAGGGCTTTTGTTGTTTGTTGGTTGGTTGTTGTTTGTTTTCTTTT
TGGAAGCTGTCTTCTCTCTAGATCTGGCCAAGAATCTTTTATGTCCCTGA
ATGTAAACGCTGAAAAAACGGTAAGAATTCTTAGGGATTTGAGGACCCTG
GCCCCGCCTGGCAAACGAAAGGCCCCGGGCTTGGCCCCCCCTGGAAAGGG
GAAAAATTTAGGGGGAAAAAATTGCAGGGGCCGGCAAAAAGTTTCAAAAA
AAAAAATTATTTTTTTCCCCCAAGGGAAAAAAAAAAAGGGGGTTTTTTTT
TTCTGGGACCCTTTAAAACAAAAAAAAATTTTGGGGGGGGGGGGGGGGCC
CCAAGAAAATTTTTTGTTGTGTTTTTTTTAAAAAAAAATTTTTTTCCCCA
CTTTT

ACGATGATGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAGATGCTGCTGGGTATAACCTTATA
AGGCAAGGAGGAAGATTAACCTGGACATTGGGCTACATGATCTCCAATGG
GCAAAGGTGGGGGCACAGGGCTATGTGCATCAGGACACTCAGGCCTTGGC
CCGGGGATGGAGGGGGAAGCATTTCTACATGTCAAAAAGAATATTCTGAA
TTATCATTCTCAGTTTTGAGACTCCAATAACTTCAATAACATGTGTAAGA
TGGCACCCAAACACACATTTTTGACCTAGCTTTACCTATAAGTAAAGCTC
ATACTGATATACATAGCTATCTGGCCCCAAGAAAGGAAAGCTCTCGAGTG
AAGCTCATCTCATGGGCTGTATCAAGATGTTTAATGCAGAGGCTTAATTA
TTTGTAACCATCTCAAGGAATAGACTAAGGGCAACCTTTCTGGAACCTTT
CTGTGTGTGTGTGTGTGGTCCTTGGTCAAACACATTCATGGAAATTATGT
GGTATTCTAATTCTGTAGACAATAAATAAATAAAAGATGCAGTAAGTAGT
GTGGTGATTTGAATATGCTTGGTCCAGGAGTGGCACTATTAGGAGGTTAT
GGTCTTGTTGGAGTAGGTATAGCCTTGCTGGAGGAAATGTGTTACTGTGG
GGGTAGACAATGAGACCATCTTTCTAGCTGCCTGAAAGACATCCCCCTCC
TTGCTGCCTTCTAATCAA

Query= MSMg01no530_b04.g1 MSMg01no530_b04.g1 CHROMAT_FILE:
MSMg01no530_b04.g1 PHD_FILE: MSMg01no530_b04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:16 2005
         (664 letters)



>mm_chr8_17836616_17837676
          Length = 1061

 Score = 1056 bits (546), Expect = 0.0
 Identities = 622/660 (94%), Gaps = 24/660 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgctgctgggtataaccttataaggcaaggaggaagattaacctggacattgggctacat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 tgctgctgggtataaccttataaggcaaggaggaagattaacctggacactgggctacat 264

                                                                       
Query: 65  gatctccaatgggcaaaggtgggggcacagggctatgtgcatcaggacactcaggccttg 124
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 gatctccaatgggcaaaggtgggggcacagggatatgtgcatcaggacactcaggccttg 324

                                                                       
Query: 125 gcccggggatggagggggaagcatttctacatgtcaaaaagaatattctgaattatcatt 184
           |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 gcccgggggtggagggggaagcatttctacatgtcaaaaagaatattctgaattttcatt 384

                                                                       
Query: 185 ctcagttttgagactccaataacttcaataacatgtgtaagatggcacccaaacacacat 244
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctcagttttgtgactccaataacttcaataacatgtgtaagatggcacccaaacacacat 444

                                                                       
Query: 245 ttttgacctagctttacctataagtaaagctcatactgatatacatagctatctggcccc 304
           |||||||||||||| |  ||||||||||||| |||||||||||||||| |||||||||| 
Sbjct: 445 ttttgacctagctt-a--tataagtaaagcttatactgatatacatagttatctggccca 501

                                                                       
Query: 305 aagaaaggaaagctctcgagtgaagctcatctcatgggctgtatcaagatgtttaatgca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aagaaaggaaagctctcgagtgaagctcatctcatgggctgtatcaagatgtttaatgca 561

                                                                       
Query: 365 gaggcttaattatttgtaaccatctcaaggaatagactaagggcaacctttctggaacct 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 562 gaggcttaattatttgtaaccatctcaaggaatagactaagggcaacctttctggaaa-- 619

                                                                       
Query: 425 ttctgtgtgtgtgtgtgtggtccttggtcaaacacattcatggaaattatgtggtattct 484
              |||               |||||||||||||||||||||||||||||||||| ||||
Sbjct: 620 ---tgt---------------ccttggtcaaacacattcatggaaattatgtggtgttct 661

                                                                       
Query: 485 aattctgtagacaataaataaataaaagatgcagtaagtagtgtggtgatttgaatatgc 544
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aattctgtagtcaataaataaataaaagatgcagtaagtagtgtggtgatttgaatatgc 721

                                                                       
Query: 545 ttggtccaggagtggcactattaggaggttatggtcttgttggagtaggtatagccttgc 604
           |||||| |||||||||||||||||||||| |||||||| |||||||||||||||| ||||
Sbjct: 722 ttggtctaggagtggcactattaggaggt-atggtcttcttggagtaggtatagctttgc 780

                                                                       
Query: 605 tggaggaaatgtgttactgtgggggtagacaatgagaccatctttctagctgcctgaaag 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tggaggaaatgtgttactgtgggggtagacaatgagaccatctttctagctgcctgaaag 840


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1061
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1051
Effective search space:   687354
Effective search space used:   687354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)