NCCCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAGTTAGCTATTCTGGCCTTTGTAGGCAATGAAAGTGTGAGGTAA
ACGTACATACATGCAGATGACATGCCCAAACAAACTTTCAAAATATTAAT
ATTTTAAAGTTAAAATCCAAATAACATTTGATCTTACACGCGTTCTCGCG
ACCGGCCAGGAAAGACGCAACAAACCGGAATCTTCTGCGGCAAAAGCTTT
ATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGAGCGCAAGAGAGAGCA
AGAGAGAGCAAGAGAGCAAGAGAGCAAGAGAGCAAGAGAGCAAGAGCAAG
AAAAAGAAAAAGAACAAGAACAAGAAAGCAAGAGCAAGAATGGCAAAACC
CCGTCCCTTTTAAGGAGAATTATCCTCTGCCTAGGACGTATTACTCCCTG
ATTGGCTGCAGCCCATCAGCTCAGTTGTCATCACGAGAAAGGCAGAACAC
ATGGCGGGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTACTACTTAG
AACACAGCTGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTCCT
CACAATTTGAGTTCTTTTGTGATTGGGTTACCTCACTTAGGATAATGCCC
TCCAGGTCCAACCATTTGCCTAGGAATTTCATAAATTCATTCTGTTTAAT
AGCTGAGTAGTACTCCATTGTGTAAATATACCACATTTTTTTTGTATCCA
TTCCTCTGTTGAGG

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGAAGTCAACCTTGAAAAGAGAACTAAT
AGTGGTGATTTAGAGTGGCCCTTGTGACCACTGAGAATTTTAGGTTTAAA
GCCAGTTTGGGGAAGCCTGTGACACTTCATCCCCTCTCTCTTAGCTGTGG
TAGAATCAAGAGTGTAAAAAAAAAAAAAACCAAAAAAACCCCCCAAAAAA
CCAAAACCAAAACCAAAACAAAAACAAAAACAAACAAACAAACAAACAAA
CAAACAAACAAACCATGGTAAAATCCACCATGCTAAATTCATATTATATC
AATACAAAGTTTACTTTTAAATCGTTGATATATGTCCCTAAGATGGCAAA
GGGAGAGCAAAGAGAAAATTATCCAGCAGTTCAGGTAGAGGGAAGACAAC
TGGAAGTTGGATTTGTGGGAAGTTGCTACTGGAAGCTCCCAGATCCTTGA
TCTTTCTTGATGAGCTGTTAAGAAGAGAGGCCTCTGCTGTAACTGCCCTG
AACCACTTATGGGATGCAATTGCTTTGTGTGCAAAGGGTAAGGGCTATTT
CTAAGGTGAGAGGAGAAAAGAAAGAACAAAATGGTGAAGTCAAGATCCCT
TTTTTAGGATAGCTAGTTCAACCTCTACATGAAGACATTGAATGTTTGGC
TGGTTGATCCAATTTCATTTTTAACTACAGAATACAGTCAGTTCTGGGAA
TGTCAGCCCCCTCCCCTTCC

Query= MSMg01no530_c09.g1 MSMg01no530_c09.g1 CHROMAT_FILE:
MSMg01no530_c09.g1 PHD_FILE: MSMg01no530_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:22 2005
         (698 letters)



>mm_chr8_17922760_17923857
          Length = 1098

 Score = 1118 bits (578), Expect = 0.0
 Identities = 628/662 (94%), Gaps = 30/662 (4%)
 Strand = Plus / Minus

                                                                        
Query: 62   agaattttaggtttaaagccagtttggggaagcctgtgacacttcatcccctctctctta 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 agaattttaggtttaaagccagtttggggaagcctgtgacacttcatcccctctctctta 1039

                                                                        
Query: 122  gctgtggtagaatcaagagtgt----------------aaaaaaaaaaaaaac------- 158
            ||||||||||||||||||||||                |||||||||||||||       
Sbjct: 1038 gctgtggtagaatcaagagtgtaaaaaacaaacaaaaaaaaaaaaaaaaaaacaaaacaa 979

                                                                        
Query: 159  --caaaaaaaccccccaaaaaaccaaaaccaaaaccaaaacaaaaacaaaaacaaacaaa 216
              |||||||| ||||||||||||||||||||||||||||||||||||||    |||||||
Sbjct: 978  aacaaaaaaa-cccccaaaaaaccaaaaccaaaaccaaaacaaaaacaa----aaacaaa 924

                                                                        
Query: 217  caaacaaacaaacaaacaaacaaaccatggtaaaatccaccatgctaaattcatattata 276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923  caaacaaacaaacaaacaaacaaaccatggtaaaatccaccatgctaaattcatattata 864

                                                                        
Query: 277  tcaatacaaagtttacttttaaatcgttgatatatgtccctaagatggcaaagggagagc 336
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 863  tcaatacaaagtttacttttaaatcgttgatatacgtccctaagatggcaaagggagagc 804

                                                                        
Query: 337  aaagagaaaattatccagcagttcaggtagagggaagacaactggaagttggatttgtgg 396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803  aaagagaaaattatccagcagttcaggtagagggaagacaactggaagttggatttgtgg 744

                                                                        
Query: 397  gaagttgctactggaagctcccagatccttgatctttcttgatgagctgttaagaagaga 456
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 743  gaagttgctactggaagctcccagatccttgatctttcttgatgagctgttaagaagaca 684

                                                                        
Query: 457  ggcctctgctgtaactgccctgaaccacttatgggatgcaattgctttgtgtgcaaaggg 516
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 683  ggcctctgctgtaactgccctgaaccacctatgggatgcaattgctttgtgtgcaaaggg 624

                                                                        
Query: 517  taagggctatttctaaggtgagaggagaaaagaaagaacaaaatggtgaagtcaagatcc 576
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623  tgagggctatttctaaggtgagaggagaaaagaaagaacaaaatggtgaagtcaagatcc 564

                                                                        
Query: 577  cttttttaggatagctagttcaacctctacatgaagacattgaatgtttggctggttgat 636
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563  cttttttaggatagctagttcaacctctacatgaagacattgaatgtttggctggttgat 504

                                                                        
Query: 637  ccaatttcatttttaactacagaatacagtcagttctgggaatgtcagccccctcccctt 696
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503  ccaatttcatttttaactacagaatacagtcagttctgggaatgtcagccccctcccctt 444

              
Query: 697  cc 698
            ||
Sbjct: 443  cc 442


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 6
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space:   748544
Effective search space used:   748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)