NAAAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGTCTCCTATCGCATCATTTGTACTGGTGAAGAGTGTGGG
CTGCACTTGAAGCACCTTTGTAATTTGGGCTTCTGTGTCTTGGGATATTC
TTTGGATCATTTACTTTTTAAAAATTTATTTGTTTATTTATTTGTTACAC
GGGTCATTTACTTTTTAAACCGTCTTTAAAGTTATCAAAGGTGGTGGTTC
AGCAGCTAATTTTTTAGCTTATTTATTTGAAGAATTGATTGCTTAGGGGG
AAATTGTTATTTTGAGATTTCTTTGCATTTAAATGTTTTTGTAATTTCCT
CTTCTTTTTAATGGACTTTACTTGTGGAAAAATAGTCTAATTTGGAGAGA
ACGCATTCTTACAAAGTGCCTGAGAAAGTTTCTTCTGGGACTAACATTCC
TAAAAAAAGGTACAGAGTTCTAATTTTAATTTATTATATTTGCTTACATT
ATAGATACTGATATTTTCCTTTCTTTCCTAAAGAAAAAGGATTATCAGAT
GTTGGACTGTTTCATTGAAAAGAACAATCACAACATAACCTCTGTAGTTG
TAACGACTAAAACAGACACATAGAAAGTTAGGGTGATGGATCGTGCCTCT
CAGGCACCTCTGTTTACAAGGCTTTGTATTACAGTGCTAAGCACTTGCCG
CACCTGTATCTTAAAGCAAGCCCCGATTACTCTGAAGTCACATAGACCAA
GGG

NNNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATACTGATTCAGTATTAT
CCTGGTCTGAGGTTATTAAGATTGTTTTGCACAAGAATAAAAAGCCACTA
TTGGGGTTGAGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCACA
AGGCCCTGGGTTCGGTCCTCAGCTCTGGGGGAAAAAAAGCCACTATTCCA
GAAGCACAAAAGGGTACAGTTAATTTTCTTCTCCTCCTTTTCTCCTTCTT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTTTTGTGGGATTATATA
GCTCTTCACAATAGTGGATAGAGGGTTTCTTTCTTTCTTTTTTAAAATTA
ATTTTAGGTATATTTTTATTATAAATGTAAAAATGAAAGCAACATAAAAC
AAGTAGAATATGTGACTATTTTCATCAACAATGGCAACAAGCAAAGTGAT
GCTGCCATAGTCAGCATCATCATTTTTAAGGAATTCATGACATCAGTGAT
GGTTTAATCTACTGGCCCTTAGGAAATCCAGTCTATCTGGTTTTTTTTTT
CATTGACTAAAAAATTTTCATACAATATATTCTAATGACACTTTCCCTCC
CCCAACTCATGCAAAATTTTCCCACTTCCCTGCCCATCCAAATCAGGGTT
CCTTGTTTTGCTCTCTAAAATACNGTAACAACAAACAACAAAAAAAAAAA
CCTTATATTTACACACACAN

Query= MSMg01no530_i24.b1 MSMg01no530_i24.b1 CHROMAT_FILE:
MSMg01no530_i24.b1 PHD_FILE: MSMg01no530_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:55 2005
         (703 letters)



>mm_chr8_34377069_34378171
          Length = 1103

 Score = 1336 bits (691), Expect = 0.0
 Identities = 697/699 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtctcctatcgcatcatttgtactggtgaagagtgtgggctgcacttgaagca 64
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gaattcagtctcctagggcatcatttgtactggtgaagagtgtgggctgcacttgaagca 700

                                                                       
Query: 65  cctttgtaatttgggcttctgtgtcttgggatattctttggatcatttactttttaaaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 cctttgtaatttgggcttctgtgtcttgggatattctttggatcatttactttttaaaaa 640

                                                                       
Query: 125 tttatttgtttatttatttgttacacgggtcatttactttttaaaccgtctttaaagtta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tttatttgtttatttatttgttacacgggtcatttactttttaaaccgtctttaaagtta 580

                                                                       
Query: 185 tcaaaggtggtggttcagcagctaattttttagcttatttatttgaagaattgattgctt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tcaaaggtggtggttcagcagctaattttttagcttatttatttgaagaattgattgctt 520

                                                                       
Query: 245 agggggaaattgttattttgagatttctttgcatttaaatgtttttgtaatttcctcttc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 agggggaaattgttattttgagatttctttgcatttaaatgtttttgtaatttcctcttc 460

                                                                       
Query: 305 tttttaatggactttacttgtggaaaaatagtctaatttggagagaacgcattcttacaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tttttaatggactttacttgtggaaaaatagtctaatttggagagaacgcattcttacaa 400

                                                                       
Query: 365 agtgcctgagaaagtttcttctgggactaacattcctaaaaaaaggtacagagttctaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 agtgcctgagaaagtttcttctgggactaacattcctaaaaaaaggtacagagttctaat 340

                                                                       
Query: 425 tttaatttattatatttgcttacattatagatactgatattttcctttctttcctaaaga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tttaatttattatatttgcttacattatagatactgatattttcctttctttcctaaaga 280

                                                                       
Query: 485 aaaaggattatcagatgttggactgtttcattgaaaagaacaatcacaacataacctctg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aaaaggattatcagatgttggactgtttcattgaaaagaacaatcacaacataacctctg 220

                                                                       
Query: 545 tagttgtaacgactaaaacagacacatagaaagttagggtgatggatcgtgcctctcagg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tagttgtaacgactaaaacagacacatagaaagttagggtgatggatcgtgcctctcagg 160

                                                                       
Query: 605 cacctctgtttacaaggctttgtattacagtgctaagcacttgccgcacctgtatcttaa 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 cacctctgtttacaaggctttgtattacagtgctaagcacttgccgcacctgtatcttaa 100

                                                  
Query: 665 agcaagccccgattactctgaagtcacatagaccaaggg 703
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 99  agcaagccccgattactctgaagtcacatagaccaaggg 61


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space:   757449
Effective search space used:   757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)