Query= MSMg01no530_p22.b1 MSMg01no530_p22.b1 CHROMAT_FILE:
MSMg01no530_p22.b1 PHD_FILE: MSMg01no530_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:30 2005
(595 letters)
>mm_chr8_59976377_59977374
Length = 998
Score = 1100 bits (569), Expect = 0.0
Identities = 583/589 (98%), Gaps = 3/589 (0%)
Strand = Plus / Plus
Query: 10 gaattcagagcattaatttattctgtaatatagaggaatatctcattgattaagtgtttt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattcagagcattaatttattctgtaatatagaggaatatctcattgattaagtgtttt 269
Query: 70 tgtttttcttattcactttatatcctgctcagtgcccccctcccagccaccccctcccga 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgtttttcttattcactttatatcctgctcagtgcccccctcccagccaccccctcccga 329
Query: 130 agtccttcccccatcccctctcccatgatctagatttttaagaagactggtaaaagaata 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agtccttcccccatcccctctcccatgatctagatttttaagaagactggtaaaagaata 389
Query: 190 gaacaagacatgctactttaaatctttcaaagaggtgacaatttttagtttaggagaaat 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaacaagacatgctactttaaatctttcaaagaggtgacaatttttagtttaggagaaat 449
Query: 250 gattcactatccttgcttagcttaaaaaaccactaacatgccaggtgtagtggcgcacac 309
|||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
Sbjct: 450 gattcactatccttgcttagcttaaaaaaccactaacatgccgggtgtagtgacgcacgc 509
Query: 310 ctttaatcccagcgcttgggaggcagaggcaggcagatttctgagttcaaagtcagcctc 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ctttaatcccagcgcttgggaggcagaggcaggcagatttctgagttcaaagtcagcctc 569
Query: 370 tggtctacagagtgagttccaggacagccagagctacacagagaaaccctgtctcgaaaa 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tggtctacagagtgagttccaggacagccagagctacacagagaaaccctgtctcgaaaa 629
Query: 430 aacaaaaacaaaagcaaacaaacaaaaaaaaa---ctcactgacaactggttaacctaga 486
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 630 aacaaaaacaaaagcaaacaaacaaaaaaaaaaaactcactgacaactggttaacctaga 689
Query: 487 aaataatgtgtcctggttttacattgaaagtttaactcaatattttagtcattgacgtat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aaataatgtgtcctggttttacattgaaagtttaactcaatattttagtcattgacgtat 749
Query: 547 gtgtgtcactgttctgagacctacagtgaatataaaaacaacagattcc 595
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 gtgtgtcactgttctgagacctacagtgaatataaaaacaacagattcc 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 998
Length adjustment: 10
Effective length of query: 585
Effective length of database: 988
Effective search space: 577980
Effective search space used: 577980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_p22.g1 MSMg01no530_p22.g1 CHROMAT_FILE:
MSMg01no530_p22.g1 PHD_FILE: MSMg01no530_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:30 2005
(602 letters)
>mm_chr8_60102607_60103608
Length = 1002
Score = 1164 bits (602), Expect = 0.0
Identities = 602/602 (100%)
Strand = Plus / Minus
Query: 1 ttatgttgaaaggtatttgaaatgttcaagatggaaacgtttcatatgttcctcaaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ttatgttgaaaggtatttgaaatgttcaagatggaaacgtttcatatgttcctcaaggtc 743
Query: 61 tgaggagagagattggaatgggagccatgatcatttggtagcatgaaaattattgatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tgaggagagagattggaatgggagccatgatcatttggtagcatgaaaattattgatgtt 683
Query: 121 tggttgtcatgaagacagcttggcattaacagtgctgtagtagtgcaggaactggcctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tggttgtcatgaagacagcttggcattaacagtgctgtagtagtgcaggaactggcctaa 623
Query: 181 ccctagagccacttccttggctacagtttgctgtgatccataaatgctatctttactgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ccctagagccacttccttggctacagtttgctgtgatccataaatgctatctttactgcc 563
Query: 241 ttctggtgtttaaccagtaggtttattcatacagaaatctgttctttgctaagatggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttctggtgtttaaccagtaggtttattcatacagaaatctgttctttgctaagatggtta 503
Query: 301 ggggttcacttgaaagctgtatgtatttcagagaagctggagtttttaaggtcttcttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggggttcacttgaaagctgtatgtatttcagagaagctggagtttttaaggtcttcttat 443
Query: 361 ttctcgccccctcctttccctttctctttcttttctttcgtttctgtttttcctggtaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttctcgccccctcctttccctttctctttcttttctttcgtttctgtttttcctggtaag 383
Query: 421 gaaacagaatgaacaaccatctgggcctgtgaggatgctgtggcagatctctaactccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gaaacagaatgaacaaccatctgggcctgtgaggatgctgtggcagatctctaactccac 323
Query: 481 aagatttctccaagcacattatgaaaagtgagcgtttgactcactactaagctctgtcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aagatttctccaagcacattatgaaaagtgagcgtttgactcactactaagctctgtcct 263
Query: 541 tccccagctttttataaacagaatagagctgctctacggggcttctataacctggatttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tccccagctttttataaacagaatagagctgctctacggggcttctataacctggatttc 203
Query: 601 tt 602
||
Sbjct: 202 tt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
