ACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTACCAGACTTTTTTTTTTTTCTTAAGTGTCCCTCCTTGTCTTTT
TTGATAACTTTGGGTTGGAAGTCGATTTTATTCGATATTAGAATGGCTAC
TCCAGCTTGTTTCTTCAGACCATTTGCTTGGAAAATTGTTTTCCAGTCTT
TCACTCTGAGGTAGTGTCTGTCTTTTTCCCTGAGATGGATTTCCTGTAAG
CAGCAGAATGTTGGATCCTGTTTGTGTAGCCAGTCTGTTAGTCTATGTCT
TTTTATTGGGGAATTGAGTTCATTGATATTAAGATATATTAAAGAAAGTA
ATTATTGCTTCCTATTATTTTTGTTTTTAGAGTTGGCATTCTGTTTTTGT
GGATGTCTTCTTTTTGGTTTGTTGAGGGATTACTTTCTTGCTTTTTCTAG
GGCGTGACTTCCGTCCTTTTTTTATATATATATACTTTTTATTAGGTATT
TTCCTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTCCC
ACCCACTCCCCTACCCACCCACTCCCCTACCCACCCATTCCCACTTTTTG
GCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGG
GCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCA
GCTAGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGCTGTTCCAC
CTATAGGGTTG

TTTTTTTTACNNNNNANNNNCCTATGCTXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGAGCC
ACAGTGATCCACTCATCCCTACTACTCTGATCACAAGCATGAGACAAGTT
CTAAAATTGAGTTGACAGACAACAGGATAAAGGGGAAAGAAAAAAATGTA
AGAAAAGAATATATCGCCAGGCATGGTGACTCATGACTGTGATCCCAGCA
CAGGGGATCCTGAGGTACAAAACTGTCATGAGTTCAAGACCGACCTGGGT
ACAAATTGGGACACTGCCTCAAGCAAATAAATAAATAAGAATAGATCATC
ATTTTTAAGTAATGCATCTTTATAAAAAATTTCCAGGTGTTACATAAACA
ACTTCTCTCATAGAACATTCTCTGTAGAAAGTATAGAACATTTCTTGAGA
ACCTTTGTCAATAGTCAGGAATGGTTGTTCACATAACTGTATTTGTGCTG
TGACCACCTCTACTTATCTATGAAATTCTGAAGAATTCTGTATTCCCAAT
GTATGATAATCGGAATGATAATTTTTCAATTTTAAGATGGTACAATAGAA
ATCTGTATGTAGAGAAGCACCTGAAAAAAAATGTACAACATCCTTAATCA
TCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTC
AGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCATGGATG
TGGAGAAAGAGA

Query= MSMg01no535_b01.g1 MSMg01no535_b01.g1 CHROMAT_FILE:
MSMg01no535_b01.g1 PHD_FILE: MSMg01no535_b01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:46 2005
         (633 letters)



>mm_chr8_62844929_62845961
          Length = 1033

 Score =  949 bits (491), Expect = 0.0
 Identities = 512/521 (98%), Gaps = 4/521 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgagccacagtgatccactcatccctactactctgatcacaagcatgagacaagttctaa 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagccactgtgatccactcatccctactactctgatcacaagcatgagacaagttctaa 260

                                                                       
Query: 61  aattgagttgacagacaacaggataaaggggaaagaaaaaaatgtaagaaaagaatatat 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 261 aattgagttgacagacaacaggacaaaggggaaagaaaaaaatgtaagaaaagaatagat 320

                                                                       
Query: 121 cgccaggcatggtgactcatgactgtgatcccagcacaggggatcctgaggtacaaaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgccaggcatggtgactcatgactgtgatcccagcacaggggatcctgaggtacaaaact 380

                                                                       
Query: 181 gtcatgagttcaagaccgacctgggtacaaattgggacactgcctcaagcaaataaataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcatgagttcaagaccgacctgggtacaaattgggacactgcctcaagcaaataaataa 440

                                                                       
Query: 241 ataagaatagatcatcatttttaagtaatgcatctttataaaaaatttccaggtgttaca 300
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataagaatagatcatcattttaaagtaatgcatctttataaaaaatttccaggtgttaca 500

                                                                       
Query: 301 taaacaacttctctcatagaacattctctgtagaaagtatagaacatttcttgagaacct 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 taaacaacttctctcatagaacattctctgtagaaagcatagaacatttcttgagaacct 560

                                                                       
Query: 361 ttgtc----aatagtcaggaatggttgttcacataactgtatttgtgctgtgaccacctc 416
           |||||    |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtctgtcaatagtcaggaatggttgttcacataactgtatttgtgctgtgaccacctc 620

                                                                       
Query: 417 tacttatctatgaaattctgaagaattctgtattcccaatgtatgataatcggaatgata 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacttatctatgaaattctgaagaattctgtattcccaatgtatgataatcggaatgata 680

                                                    
Query: 477 atttttcaattttaagatggtacaatagaaatctgtatgta 517
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atttttcaattttaagatggtacaatagaaatctgtatgta 721


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)