Query= MSMg01no535_i21.b1 MSMg01no535_i21.b1 CHROMAT_FILE:
MSMg01no535_i21.b1 PHD_FILE: MSMg01no535_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:24 2005
(584 letters)
>mm_chr8_94548894_94549878
Length = 985
Score = 1042 bits (539), Expect = 0.0
Identities = 574/593 (96%), Gaps = 13/593 (2%)
Strand = Plus / Plus
Query: 5 gaattctcctgcttgttttc-aatcaggattagaaagtccctagaacgtcacctcaccca 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcctgcttgttttcaaatcaggattagaaagtccctagaacgtcacctcaccca 264
Query: 64 agatgatgactgcaattcaacccagttaatttgcaggcaggccattttgtattccaatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agatgatgactgcaattcaacccagttaatttgcaggcaggccattttgtattccaatgt 324
Query: 124 tccagcactggtaaatagatgcttaactgaggcatggttgaatgctatgtttgagtagtt 183
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 tccagcactggtaaatagatgctcaactgaggcatggttgaatgctatgtttgagtagtt 384
Query: 184 tgttttgtcttcactgaaaaatttatgaaattcgttgcttcaaatgtccttgaatgaata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 tgttttgtcttcactgaaaaatttatgaaattcgttgcttcaaatgtccttgaatgagta 444
Query: 244 tctccataccactctagtgagagaactctttcaaatcaccataacgacagttgtgaatgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctccataccactctagtgagagaactctttcaaatcaccataacgacagttgtgaatgt 504
Query: 304 tttcttgagaattgtttctttacttgtttgttaatatgtccacatttgagaagctcaaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttcttgagaattgtttctttacttgtttgttaatatgtccacatttgagaagctcaaac 564
Query: 364 tactcttaaaatgctgacgattggatatagcaggaattcacaccacatctctcacctctc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tactcttaaaatgctgacgattggatatagcaggaattcacaccacatctctcacctctc 624
Query: 424 tctctctctctctctctctctctctctctctctctctcacacac------------acac 471
|||||||||||||||||||||||||||||||||||||| | | | ||||
Sbjct: 625 tctctctctctctctctctctctctctctctctctctctctctctctctctctctcacac 684
Query: 472 acacacacacacacacacacacacacacacaattgaatgatgctacctgcttctcccagg 531
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 685 acacacacacacacacacacacacacacacgattgaatgatgctacctgcttctcccagg 744
Query: 532 gaaattcatctgaatgaaatctgccctgcatctagcagcctgcccagtccagg 584
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaaattcatctgaatgaaatctgccctgcatctagcagcctgcccagtccagg 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 985
Length adjustment: 10
Effective length of query: 574
Effective length of database: 975
Effective search space: 559650
Effective search space used: 559650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_i21.g1 MSMg01no535_i21.g1 CHROMAT_FILE:
MSMg01no535_i21.g1 PHD_FILE: MSMg01no535_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:24 2005
(534 letters)
>mm_chr8_94766754_94767688
Length = 935
Score = 845 bits (437), Expect = 0.0
Identities = 440/441 (99%), Gaps = 1/441 (0%)
Strand = Plus / Minus
Query: 95 tagccctggttcatcccccaaaaaagtgcatgctttcaagctcaccctgagtaaatcgca 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 tagccctggttcatcccccaaaaaagtgcatgctttcaagctcaccctgagtaaatcgca 876
Query: 155 tgtgcacaaggtaagactgtctgagagagctgtttcactgaagactccatcttacctgtc 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tgtgcacaaggtaagactgtctgagagagctgtttcactgaagactccatcttacctgtc 816
Query: 215 cagtgtgcagcagcatcaggataccctgagagggaggaagtggacgactcagaacaacag 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 cagtgtgcagcagcatcaggataccctgagagggaggaagtggacgactcagaacaacag 756
Query: 275 ctgaaggtgtggccccaacacatgagggggctgccaaggaggcaactcggggatcagtga 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ctgaaggtgtggccccaacacatgagggggctgccaaggaggcaactcggggatcagtga 696
Query: 335 ttcaatgcattatggaggtgactgttcaggctctcggctgtactggatgcttctagaaag 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttcaatgcattatggaggtgactgttcaggctctcggctgtactggatgcttctagaaag 636
Query: 395 gtctggagtgcctctctctggcatgctcagctgggacagtccttggctggctgagtattg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gtctggagtgcctctctctggcatgctcagctgggacagtccttggctggctgagtattg 576
Query: 455 tccttgcagtgagtttccctgcactt-aaaaaatacattttatttacttgttttgggtat 513
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 575 tccttgcagtgagtttccctgcacttaaaaaaatacattttatttacttgttttgggtat 516
Query: 514 gtacagactcatgtgccattg 534
|||||||||||||||||||||
Sbjct: 515 gtacagactcatgtgccattg 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space: 484700
Effective search space used: 484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
