Query= MSMg01no536_c02.b1 MSMg01no536_c02.b1 CHROMAT_FILE:
MSMg01no536_c02.b1 PHD_FILE: MSMg01no536_c02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:09 2005
(507 letters)
>mm_chr8_110699689_110700594
Length = 906
Score = 926 bits (479), Expect = 0.0
Identities = 497/503 (98%), Gaps = 1/503 (0%)
Strand = Plus / Plus
Query: 5 gaattcatttctttctctcaatattctgtagaaaaatgatggacgttctagaatcttgac 64
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttcgctctgtcaatattctgtagaaaaatgatggacgttctagaatcttgac 264
Query: 65 gttgatattaattcaccctttcgatgggtctaccgaggggcagctttccctcccctccag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttgatattaattcaccctttcgatgggtctaccgaggggcagctttccctcccctccag 324
Query: 125 tgttctcgtttgctcctccctgtgctcctgaccctgggtctcagcttcttccatgcagca 184
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 tgttctcatttgctcctccctgtgctcctgaccctgg-tctcagcttcttccatgcagca 383
Query: 185 gccgagtgtatgcagctgtgtctgtccttattacctctgcagactgcaggtctctttgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gccgagtgtatgcagctgtgtctgtccttattacctctgcagactgcaggtctctttgta 443
Query: 245 tattaagcccaccatagcagcaatgaaattcagatttatagctggaaatcagcctatttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tattaagcccaccatagcagcaatgaaattcagatttatagctggaaatcagcctatttg 503
Query: 305 taatataaacataaacactgaaaccctagaaacagatgaaaaatagatttttttccttgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taatataaacataaacactgaaaccctagaaacagatgaaaaatagatttttttccttgc 563
Query: 365 ttgcttgcttgctttgtgtttttcctttcttggaattttatgacttgggccttaccccgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgcttgcttgctttgtgtttttcctttcttggaattttatgacttgggccttaccccgg 623
Query: 425 tcctattttaaaattttctcagaccatgtaatataattgataatagtatataagcagcat 484
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 624 tcctattttaaaattttctcagaccatgtaatataattgataatagtgtataagcagcat 683
Query: 485 ctaatatcaccctgcatggcaca 507
|||||||||||||||||||||||
Sbjct: 684 ctaatatcaccctgcatggcaca 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 906
Length adjustment: 10
Effective length of query: 497
Effective length of database: 896
Effective search space: 445312
Effective search space used: 445312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_c02.g1 MSMg01no536_c02.g1 CHROMAT_FILE:
MSMg01no536_c02.g1 PHD_FILE: MSMg01no536_c02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:09 2005
(624 letters)
>mm_chr8_110896010_110897033
Length = 1024
Score = 1181 bits (611), Expect = 0.0
Identities = 617/619 (99%)
Strand = Plus / Minus
Query: 6 ggtgcagttgctgccctgcgtccccccactcttgggtcacttttgtgatagcagctgcca 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 ggtgcagttgctgccctgtgtccccccactcttgggtcacttttgtgatagcagctgcca 965
Query: 66 attctgtcacaactccctatctcatcccagaatcctagagtttcagggccagaaggggat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 attctgtcacaactccctatctcatcccagaatcctagagtttcagggccagaaggggat 905
Query: 126 gagccggagatgtagctcagtggtagagcccttgccaagcaaccatgaggacctggcttc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 gagccggagatgtagctcagtggtagagcccttgccaagcaaccatgaggacctggcttc 845
Query: 186 tgtcaacagcacagcaaagacagaagtacaaagggcagtaataagttgtcacctggtaaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tgtcaacagcacagcaaagacagaagtacaaagggcagtaataagttgtcacctggtaaa 785
Query: 246 ccgaactatcatccattttaaatgtttggtcttgggttttgtttgtttctgatcttactt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ccgaactatcatccattttaaatgtttggtcttgggttttgtttgtttctgatcttactt 725
Query: 306 cttatttttgattaaagattggcagaatgcttttgggggactagagtgtgaggccagcta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cttatttttgattaaagattggcagaatgcttttgggggactagagtgtgaggccagcta 665
Query: 366 aagccctgtaaggtgagagtctagactccaaggagagccagattacaaggacactgtgca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aagccctgtaaggtgagagtctagactccaaggagagccagattacaaggacactgtgca 605
Query: 426 caaggaataaaggaccctgaagtccctgtgaggatgccattgattgtaatcactgcatgc 485
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cagggaataaaggaccctgaagtccctgtgaggatgccattgattgtaatcactgcatgc 545
Query: 486 cagagctttgctgcctgggttgtcaaatttaggagagcaacatttgtggaggaaaccagg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cagagctttgctgcctgggttgtcaaatttaggagagcaacatttgtggaggaaaccagg 485
Query: 546 tgttcatacagtggtaaaggggctcccccaacaaatttgcccagggcataaaggtgattt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgttcatacagtggtaaaggggctcccccaacaaatttgcccagggcataaaggtgattt 425
Query: 606 tatgtgggaaagcctgtca 624
|||||||||||||||||||
Sbjct: 424 tatgtgggaaagcctgtca 406
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
