Query= MSMg01no537_m24.b1 MSMg01no537_m24.b1 CHROMAT_FILE:
MSMg01no537_m24.b1 PHD_FILE: MSMg01no537_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:17 2005
(615 letters)
>mm_chr8_100062634_100063648
Length = 1015
Score = 1152 bits (596), Expect = 0.0
Identities = 608/612 (99%), Gaps = 1/612 (0%)
Strand = Plus / Minus
Query: 5 gaattcttggaatcttacactcataacaagtaatttgggttttcaaccacaccaatctga 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gaattcttggaatcaaacactcataacaagtaatttgggttttcaaccacaccaatctga 581
Query: 65 ctgtgttcaaataataagatgctccaaagaaagttgtttcactttgggaaaattccttac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctgtgttcaaataataagatgctccaaagaaagttgtttcactttgggaaaattccttac 521
Query: 125 attctgttgtcttccaggacttcataagacccatatcttctatttacttgctaaatctaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 attctgttgtcttccaggacttcataagacccatatcttctatttacttgctaaatctaa 461
Query: 185 tctaccgtggctttcttttagattcttagaaacaaagttgttcagctcagaggattcata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tctaccgtggctttcttttagattcttagaaacaaagttgttcagctcagaggattcata 401
Query: 245 gaatatcctgtctttacagaacactcctttactcttactaggcactcaaaatctatcaat 304
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggatatcctgtctttacagaacactcctttactcttactaggcactcaaaatctatcaat 341
Query: 305 ttacttcatcacagcaacccaatggtacagataacaaattaggcagagtcagccctttgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttacttcatcacagcaacccaatggtacagataacaaattaggcagagtcagccctttgt 281
Query: 365 ccatgtattaagcaaacaagtgttcaaaactattggaaagacaaatgtgaaacatctaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ccatgtattaagcaaacaagtgttcaaaactattggaaagacaaatgtgaaacatctaca 221
Query: 425 gtaattgtttgtttggtttttttgcatagtttcccaaacaataaaatcaatgactactta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gtaattgtttgtttggtttttttgcatagtttcccaaacaataaaatcaatgactactta 161
Query: 485 tacagcatttgtagtaagtagggtcagtaatttagagat-aaaaacaatgacatacatgt 543
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 160 tacagcatttgtagtaagtagggtcagtaatttagagataaaaaacaatgacatacatgt 101
Query: 544 atagattataaacagaaattgtgcagtattacagaagggaccttgagcatctgcacatgt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atagattataaacagaaattgtgcagtattacagaagggaccttgagcatctgcacatgt 41
Query: 604 cagtaactacag 615
||||||||||||
Sbjct: 40 cagtaactacag 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_m24.g1 MSMg01no537_m24.g1 CHROMAT_FILE:
MSMg01no537_m24.g1 PHD_FILE: MSMg01no537_m24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:17 2005
(622 letters)
>mm_chr8_99907997_99909018
Length = 1022
Score = 1137 bits (588), Expect = 0.0
Identities = 617/630 (97%), Gaps = 8/630 (1%)
Strand = Plus / Plus
Query: 1 cagggtaacactatcttccttaggtcaccatgacccaatatttagttactggcttggcaa 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cagggtaacactatcttacttaggtcaccatgacccaatatttagttactggcttggcaa 252
Query: 61 gaagacttactcaattttctcatagcccctatacttataagtttcagaaaactaatcctt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 gaagacttactcaattttctcatagcccctatacttataagtttcagaaagctaatcctt 312
Query: 121 tctaaaaatttaaatgtaagattgcagtataataaaaaataaaataaaataacctaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 313 tctaaaaatttaaatgtaagattgcagtataataaaaaataaaataaaataacttaaata 372
Query: 181 tttcattgacacttatcttgatgattttctgcttccactagcccttctggtggtaaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tttcattgacacttatcttgatgattttctgcttccactagcccttctggtggtaaagat 432
Query: 241 attgaaatagcagaccctcttctatgggataaatgtaacacaagtgatattctcttcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 attgaaatagcagaccctcttctatgggataaatgtaacacaagtgatattctcttcctg 492
Query: 301 gttatatccagcatgactcagaaagagtgtgagaaacaattctatttgaatttaaacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gttatatccagcatgactcagaaagagtgtgagaaacaattctatttgaatttaaacttc 552
Query: 361 tgctttcttaaagctgaacagaaatcccaattaatactatttgtttgaatgtggctcttc 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 553 tgctttcttaaagctgaacagaaagcccaattaatactatttgtttgaatgtggctcttc 612
Query: 421 tagacaaatttc-ttt------c-aagagtcttggcacacaggagatggcttggtcagta 472
|||||||||||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 613 tagacaaatttcctttaagagtctaagagtcttggcacacaggagatggcttggtcagta 672
Query: 473 gggtatttgccacatagcactacaagtttggtcttcagtagcaacatgtaaaagctggct 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gggtatttgccacatagcactacaagtttggtcttcagtagcaacatgtaaaagctggct 732
Query: 533 ctagtggtgtatggtgtgtgtctgtagtgcagtgagaagagaagagaggagcatggtaat 592
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 733 ctagtggtgtatggtgtgtgtctgtagtgcagtgagaagagacgagaggagcatggtaat 792
Query: 593 ggtggtgctggtgctggtgctggtgctggt 622
||||||||||||||||||||||||||||||
Sbjct: 793 ggtggtgctggtgctggtgctggtgctggt 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
