XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTCCTT
AGTTAAAAAGGAATAACTAAGAGTATTTTAGGAAATGAACATTATGATTA
ACTGGGGAATATTTTATACAAATGAAAAATATTAAATGAATGTCCTGACT
CTGGACATATACAATTTTTCTGTGTTCTCTATAGTTTTTGCTTTCTCAAG
AGGCACTGAAAACCATTAGACTGAGCACAGGAGGAGCTAGAGAAAGCACA
CAAGGAGCTGAAGGGATTTGCAGCCCCATAGGAGAAACAACAATATGAAC
CAACCAGTACCCTCAGAGCTCCCAGGGACTAAATAAACCACCAACCAAAG
AGTACACATGGAGGGACCTATAGCTCCAGCTGCATATGTAGCATAGGATA
ACCTTGTTCGACATGAGTGGGAGAAGAGGACCCTGTTCCTGTGAAGTCCA
GATGCCCCATTGTAGGGGACTGCCAGGACAGGGAAGCAGCAGTGGGTGGG
TTGGTGAGCAGGAGGAGGAAGGATGGGATANGGGGTTTTTTNTTTTTNNN
TTTTNTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTNTNTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTT
TTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTGTNTTTTTTTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCATCTCCTAGAATGAGACTTAATAGCCAGATGTTA
TGCATGGAGTGAAAGAGCTTGTAAAAATGATCTCCAAATGGGATGTATAG
AGAACCTCATTGTGGGCTTAAGGCACTGTTGACCTAGGTCTCAGCACAGG
GGAGAGTTATTTGCTCCAGAGGGAAAATAGCAAGAATAATAGATTAAGAC
AGGAGATAAAGGATGAGGGAGAAGTGGAAATGAACAAGAGATATGGGGGT
AAGGAAATTTGTACCAGGGGTTTCAAGTGAGGAGGTGAGGAGTGGGGGAG
GGCAACAAGGACTGCCTCTGGATAGAAAGAAGAAAGATGTGGTCCATAAG
TAAATGGCATATATGAGTTCACAGAGACTGTGACAGCATTCATCATGCCT
TCCCGACTGCACCAGGTCCTTTGAATACATATTATCGTTGTCAGTTTTGT
GTTTTAATGGGTGGGATTCCAGTGTGTGTGAGTGAGTAGATTCTGTTTCT
TTTGCTTTCTTACACACTGTTCCTTATGGTGCAGGAAATATTAAATAATG
TAAAAATTTGAAAATACTAAAAAAATACTAAAACAGAAAAATCAATTTTA
AAAAAATCTAAAGAAACCCAAAAGGGGGAGAGAAAGGAAATTATGTAAAT
ATTTTTATAATTAATATTTTAAAAACTCACCAATAAAACACTCCAGAT

Query= MSMg01no538_h12.b1 MSMg01no538_h12.b1 CHROMAT_FILE:
MSMg01no538_h12.b1 PHD_FILE: MSMg01no538_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:08 2005
         (482 letters)



>mm_chr8_104219283_104220164
          Length = 882

 Score =  909 bits (470), Expect = 0.0
 Identities = 476/478 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttccttagttaaaaaggaataactaagagtattttaggaaatgaacattatgat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttccttagttaaaaaggaataactaagagtattttaggaaatgaacattatgat 264

                                                                       
Query: 65  taactggggaatattttatacaaatgaaaaatattaaatgaatgtcctgactctggacat 124
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taactggggaatatcttatacaaatgaaaaatattaaatgaatgtcctgactctggacat 324

                                                                       
Query: 125 atacaatttttctgtgttctctatagtttttgctttctcaagaggcactgaaaaccatta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atacaatttttctgtgttctctatagtttttgctttctcaagaggcactgaaaaccatta 384

                                                                       
Query: 185 gactgagcacaggaggagctagagaaagcacacaaggagctgaagggatttgcagcccca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gactgagcacaggaggagctagagaaagcacacaaggagctgaagggatttgcagcccca 444

                                                                       
Query: 245 taggagaaacaacaatatgaaccaaccagtaccctcagagctcccagggactaaataaac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taggagaaacaacaatatgaaccaaccagtaccctcagagctcccagggactaaataaac 504

                                                                       
Query: 305 caccaaccaaagagtacacatggagggacctatagctccagctgcatatgtagcatagga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caccaaccaaagagtacacatggagggacctatagctccagctgcatatgtagcatagga 564

                                                                       
Query: 365 taaccttgttcgacatgagtgggagaagaggaccctgttcctgtgaagtccagatgcccc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaccttgttcgacatgagtgggagaagaggaccctgttcctgtgaagtccagatgcccc 624

                                                                     
Query: 425 attgtaggggactgccaggacagggaagcagcagtgggtgggttggtgagcaggagga 482
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 625 attgtaggggactgccaggacagggaagcaggagtgggtgggttggtgagcaggagga 682


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space:   411584
Effective search space used:   411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)