Query= MSMg01no538_n06.b1 MSMg01no538_n06.b1 CHROMAT_FILE:
MSMg01no538_n06.b1 PHD_FILE: MSMg01no538_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:34 2005
(648 letters)
>mm_chr8_17861500_17862548
Length = 1049
Score = 1224 bits (633), Expect = 0.0
Identities = 642/645 (99%), Gaps = 1/645 (0%)
Strand = Plus / Minus
Query: 5 gaattcttagtgtggatgccttacaggagttcctgtctcacaaagctaaaaaccctgcgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gaattcttagtgtggatgccttacaggagttcctgtctcacaaagctaaaaaccctgcgt 790
Query: 65 ttctactaaaaaaaagttacagtgagctgtgttgctttacaagggtggctgtcaagacca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ttctactaaaaaaaagttacagtgagctgtgttgctttacaagggtggctgtcaagacca 730
Query: 125 tacaacaaagaactgtggagtctattttactgggggtatttttaaatttactgttttgct 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tacaacgaagaactgtggagtctattttactgggggtatttttaaatttactgttttgct 670
Query: 185 cgcaaagatattcatatatatgatttgtcttccttttcctcagctgaga-tttttttgtc 243
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 669 ctcaaagatattcatatatatgatttgtcttccttttcctcagctgagattttttttgtc 610
Query: 244 cttaagatttagctaattcctgaaattctttttgttttccttacatattttggcaaaatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cttaagatttagctaattcctgaaattctttttgttttccttacatattttggcaaaatt 550
Query: 304 acttttaaagattttcatggaagccattagtgtcaacttttcatttgaacacagtgactc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 acttttaaagattttcatggaagccattagtgtcaacttttcatttgaacacagtgactc 490
Query: 364 agtgtcttggcctcctgaagtgtacaaagttcctccattcccatctgtgattatatgatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 agtgtcttggcctcctgaagtgtacaaagttcctccattcccatctgtgattatatgatt 430
Query: 424 atcatgggcatcaagtatattcagcagaaatgcaggtctggctcagctacttagggattt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atcatgggcatcaagtatattcagcagaaatgcaggtctggctcagctacttagggattt 370
Query: 484 ttgcctggactctggatgattcccctgacagtttctcatgtctctgttgggcaattcaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttgcctggactctggatgattcccctgacagtttctcatgtctctgttgggcaattcaca 310
Query: 544 tatcttcttccttatacttggtttgctattgcttgctgttatctcagccctcctggctgc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tatcttcttccttatacttggtttgctattgcttgctgttatctcagccctcctggctgc 250
Query: 604 caatatgcactcagttaggaaatgaaggcatgggatacatctaag 648
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 caatatgcactcagttaggaaatgaaggcatgggatacatctaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_n06.g1 MSMg01no538_n06.g1 CHROMAT_FILE:
MSMg01no538_n06.g1 PHD_FILE: MSMg01no538_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:34 2005
(645 letters)
>mm_chr8_17734520_17735569
Length = 1050
Score = 1135 bits (587), Expect = 0.0
Identities = 633/651 (97%), Gaps = 7/651 (1%)
Strand = Plus / Plus
Query: 1 cacctaccagctgctaaaggaaaaattgtggtgttaag-----gactatgacgtgtcagc 55
||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||
Sbjct: 201 cacctaccagctgctaaaggaaaaactgtgatgttaagtactggactatgacgtgtcagc 260
Query: 56 tccatcatagagtcctcagaatattaaaaaaaaaaacctacagagatggtagactgcata 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 tccatcatagagtcctcagaatattaaaaaaaaaaacctacagagatggtagactacata 320
Query: 116 cttctttcttgaaagaagagtcccctcaaaattgaggtatctgtgtcacttctatcacct 175
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 321 cttctttcttgaaagaagagtcccctcaaaattgagatatcggtgtcacttctatcacct 380
Query: 176 ccagactgtgtgatgtttaaatgtccattt-gttggaagacatgtttagaactcttcctc 234
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
Sbjct: 381 ccagactgtgtgatgtttaaatgtccattttgt-ggaagacatgtttagaactcttcccc 439
Query: 235 tgacacatatatggtattttcaatatgtaaaataatacaaaccgaagaaagaatttattg 294
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 tgacacatatatggtattttcaatatgggaaataatacaaaccgaagaaagaatttattg 499
Query: 295 tgcatcaatgacagtgcttcatgaaaatcaagacaagttctaactacagcttactctgta 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgcatcaatgacagtgcttcatgaaaatcaagacaagttctaactacagcttactctgta 559
Query: 355 gatggcctcccttgttctgttaaacctcaagatggagttaggttaattcataacagaaaa 414
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 560 gatggcctcccttgttctgttaaacctcaagatgcagttaggttaattcatagcagaaaa 619
Query: 415 tcattccatgtgattacctcacctttgtggctctgttggtatatacacacagttccactt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcattccatgtgattacctcacctttgtggctctgttggtatatacacacagttccactt 679
Query: 475 atttgcatgctgggaaattgtgtacattcatgtaaatatgtatgaactatgtatgatctg 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atttgcatgctgggaaattgtgtacattcatgtaaatatgtatgaactatgtatgatctg 739
Query: 535 gctaaataggagaagaaagaacaaaggaggacaagattatctctcaaaatgttcttggga 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gctaaataggagaagaaagaacaaaggaggacaagattatctctcaaaatgttcttggga 799
Query: 595 aacaaattaagattttgaagaggatgtaatgaaggggttcttttctgaagt 645
||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 800 aacaaattaagattttgaagaggatttaatgaaggggttcttttctgaagt 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1050
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1040
Effective search space: 660400
Effective search space used: 660400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
